| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0152 |
|---|
| Symbol | |
|---|
| ID | 6742941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Hydrogenobaculum sp. Y04AAS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011126 |
|---|
| Strand | - |
|---|
| Start bp | 136690 |
|---|
| End bp | 138462 |
|---|
| Gene Length | 1773 bp |
|---|
| Protein Length | 590 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 642749942 |
|---|
| Product | ABC transporter domain protein |
|---|
| Protein accession | YP_002120822 |
|---|
| Protein GI | 195952532 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0199241 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTAAAAT TAAGTAAGAT GGACAGTAAT ATAAGTAAAC TGGATAAGAC TTTCTGGAAA
GATTTCTGGC ATATATTAAA ACCCTATTGG CTTCATTCGG AAGAAAAGAA AAAAGCTTGG
CTTTTGTTTT TTGTGATAAT TTTTTTAAAT CTTTTCCAAG TATTTTTAAA TGTGCTTTTT
ACAAAATGGT ATAAAGTTTT TTACGATGCA TTGCAACACT TTGATGAAAA AGGCTTTTGG
AAAGCGCTTT TAGAGTTTAG CATCTTAGCA ACGCTTTTTA TAGTATCGGC AGTCTATGCT
ACATATCTTC AACAGATGCT TCAGATAAAA TGGAGAGCTT GGCTCACATC ACACTACATA
AACAAATGGG TAAGCAATAA AAAGTTTTAC CACATGCAAG TTATAGAACA AAACACCGAT
AACCCAGACC AACGTATAGC AGATGACGTA AATGCCTTTA TAAGCCAAAG CTTAGGACTA
TTTTTGGGAC TAATGAGCTC GGTGGTAACG TTTTTCTCAT TTGTCGGAAT GCTTTGGATC
ATATCTGGTC CTATAAGTTT TAATGCTTTT CATATTAAAA TCACAATACC AGCTTATATG
GTTTGGGCAG CGATTATATA CGCTATATTA GGGACTTATA TAACCGCCAA AATCGGTAAA
CCTCTAGTGA AACTAAACTT TGACCAACAA ATGTTTGAAG CAAACTTTAG ATTTGCTTTG
ATAAGAATAA GAGAAAATTC AGAATCTGTA GCTCTTTTAA ACGCGGAAGA AAAAGAGCAT
CAAAACCTCA TGGATACATT TAGATACGTA TTTCAAAACT ATTGGCAAAT CATGGTAAGG
CTAAAAATGC TTGGATGGTT TACATCTGGA TACAATCAAA TAGCCATTAT ATTCCCGATA
CTCGTAGCAG CTCCGAGGTT TTTTGCCAAA AAAATACAGC TTGGTGACGT GATGCAAATA
GCTAGCGCTT TTGGTCAAGT GCAATCGTCT TTATCTTTTA TAGTAAATTC TTACGCTTCA
ATAGCCGCTT GGTATTCGGT GGTAGACAGG CTTAGGACTT TTGAGAAAAA TATAAAAGCT
ATAGAAACTT CTCAAAATCA AAGCAAGATA ACTATTTTGC CAAGCCAAGA TGGACTAACA
ATAGAACATT TAAGTATAAA GATACCTTAT TCTGAGAAGT TTATCGTAAA AAATCTAAAC
CTTAATGTAG ATAAAAAAGA ACATACTATA ATAATGGGAC CCTCTGGTGT CGGTAAATCT
ACTCTCATAA GAGCAATAGC CGGCATTTGG CCCTTTGGAG AAGGAACCAT AAAACTGCCG
CAAAACCATA TGTTTTTACC GCAAAAACCT TATTTTCCAT ATGGAAGTCT AAGGGAGATA
CTTTTATACC CATCTACAGA TGGCAAAGCT GTGTCAAATG AATATTTGGA AGAACTTTTA
AACATAGTGG GTCTTTCTTA CCTTTCAAAG GATTTAAACA CAAAAAATCT ATGGTCTCAG
GTGCTTTCTC CCGGTGAACA GCAAAACCTC AACATAGCAA GGGTATTGCT TCATTCACCG
GATTGGCTTT TTATGGATGA ATCCACAAGT GCCTTAAACG AAGAAAAAGA ACTACACCTT
TATAGCCTTT TATTAGAAAA GCTTAAAAAC CTAACGATAA TAAGCGTTGC TCATCGTAAA
TCTTTGGAAG ATTTTCACCT TAAAAAACTG ATTTTGAAAG AAAACGCTCA ATACGAGATA
ACGTATATTC AAAAATCTAT AAGATCTATT TAA
|
|---|
| Protein sequence | MVKLSKMDSN ISKLDKTFWK DFWHILKPYW LHSEEKKKAW LLFFVIIFLN LFQVFLNVLF
TKWYKVFYDA LQHFDEKGFW KALLEFSILA TLFIVSAVYA TYLQQMLQIK WRAWLTSHYI
NKWVSNKKFY HMQVIEQNTD NPDQRIADDV NAFISQSLGL FLGLMSSVVT FFSFVGMLWI
ISGPISFNAF HIKITIPAYM VWAAIIYAIL GTYITAKIGK PLVKLNFDQQ MFEANFRFAL
IRIRENSESV ALLNAEEKEH QNLMDTFRYV FQNYWQIMVR LKMLGWFTSG YNQIAIIFPI
LVAAPRFFAK KIQLGDVMQI ASAFGQVQSS LSFIVNSYAS IAAWYSVVDR LRTFEKNIKA
IETSQNQSKI TILPSQDGLT IEHLSIKIPY SEKFIVKNLN LNVDKKEHTI IMGPSGVGKS
TLIRAIAGIW PFGEGTIKLP QNHMFLPQKP YFPYGSLREI LLYPSTDGKA VSNEYLEELL
NIVGLSYLSK DLNTKNLWSQ VLSPGEQQNL NIARVLLHSP DWLFMDESTS ALNEEKELHL
YSLLLEKLKN LTIISVAHRK SLEDFHLKKL ILKENAQYEI TYIQKSIRSI
|
|---|
| |