Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0148 |
Symbol | |
ID | 6742935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | - |
Start bp | 132882 |
End bp | 133499 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 642749936 |
Product | ATP-dependent Clp protease, proteolytic subunit ClpP |
Protein accession | YP_002120818 |
Protein GI | 195952528 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0054433 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGCAACC CTAAAGATTA TCAGAAGATT ATAGATCAAC TTGTACCGAT AGTAGTTGAA CAAACACCTC GTGGTGAAAG AGCCTACGAT ATATATTCGA GGCTTTTACA AGATCGTATA GTTATACTTG GTTTTCCTAT AGATGACCAC GTGGCAAACC TTATAGTAGC CCAGCTTTTG TTTTTAGAAG CCCAAGACCC TGAAAAAGAT ATACAAATGT ATATAAACTC CCCTGGTGGT TCTGTTACAG CAGGTCTTGC TATATACGAC ACTATGCAGT ATATAAAGCC TGATGTAACC ACTATATGCA TAGGACAAGC AGCTTCTATG GGAGCGGTGC TTTTGGCAGC TGGTACAAAA GGAAAAAGGT TTGCGCTTCC AAACGCTCGC ATCATGATAC ACCAACCACT TGGAGGCGTA CAAGGTCAAG CTACAGATAT ACTTATACAC GCTGAGGAGA TAAAACGTAT AAAACACATA TTAAATACCA TATTGGCAAA CGCCACCGGT AAAAACTTAA GACAAATAGA AAAAGATGTG GATAGAGATT ACTTTATGTC TGCCGAAGAA GCCAAAAACT ATGGGCTTAT AGACAAAGTA ATCACGAAGA GGGCTTAA
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Protein sequence | MSNPKDYQKI IDQLVPIVVE QTPRGERAYD IYSRLLQDRI VILGFPIDDH VANLIVAQLL FLEAQDPEKD IQMYINSPGG SVTAGLAIYD TMQYIKPDVT TICIGQAASM GAVLLAAGTK GKRFALPNAR IMIHQPLGGV QGQATDILIH AEEIKRIKHI LNTILANATG KNLRQIEKDV DRDYFMSAEE AKNYGLIDKV ITKRA
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