Gene HY04AAS1_0148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHY04AAS1_0148 
Symbol 
ID6742935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHydrogenobaculum sp. Y04AAS1 
KingdomBacteria 
Replicon accessionNC_011126 
Strand
Start bp132882 
End bp133499 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content39% 
IMG OID642749936 
ProductATP-dependent Clp protease, proteolytic subunit ClpP 
Protein accessionYP_002120818 
Protein GI195952528 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID[TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0054433 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCAACC CTAAAGATTA TCAGAAGATT ATAGATCAAC TTGTACCGAT AGTAGTTGAA 
CAAACACCTC GTGGTGAAAG AGCCTACGAT ATATATTCGA GGCTTTTACA AGATCGTATA
GTTATACTTG GTTTTCCTAT AGATGACCAC GTGGCAAACC TTATAGTAGC CCAGCTTTTG
TTTTTAGAAG CCCAAGACCC TGAAAAAGAT ATACAAATGT ATATAAACTC CCCTGGTGGT
TCTGTTACAG CAGGTCTTGC TATATACGAC ACTATGCAGT ATATAAAGCC TGATGTAACC
ACTATATGCA TAGGACAAGC AGCTTCTATG GGAGCGGTGC TTTTGGCAGC TGGTACAAAA
GGAAAAAGGT TTGCGCTTCC AAACGCTCGC ATCATGATAC ACCAACCACT TGGAGGCGTA
CAAGGTCAAG CTACAGATAT ACTTATACAC GCTGAGGAGA TAAAACGTAT AAAACACATA
TTAAATACCA TATTGGCAAA CGCCACCGGT AAAAACTTAA GACAAATAGA AAAAGATGTG
GATAGAGATT ACTTTATGTC TGCCGAAGAA GCCAAAAACT ATGGGCTTAT AGACAAAGTA
ATCACGAAGA GGGCTTAA
 
Protein sequence
MSNPKDYQKI IDQLVPIVVE QTPRGERAYD IYSRLLQDRI VILGFPIDDH VANLIVAQLL 
FLEAQDPEKD IQMYINSPGG SVTAGLAIYD TMQYIKPDVT TICIGQAASM GAVLLAAGTK
GKRFALPNAR IMIHQPLGGV QGQATDILIH AEEIKRIKHI LNTILANATG KNLRQIEKDV
DRDYFMSAEE AKNYGLIDKV ITKRA