| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0061 |
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| Symbol | |
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| ID | 6742843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | - |
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| Start bp | 57534 |
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| End bp | 59111 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642749845 |
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| Product | RNA binding S1 domain protein |
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| Protein accession | YP_002120731 |
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| Protein GI | 195952441 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000665212 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAACAG AGTTTGAAGA GTTATTAAAA GCTCAAAAGG AGCAGTTTTC CACAGGAAGC
GTAGTAAAGG GTTCTGTGGT AAAAATTACA GATTCAAACG TGTACTTGGA TATAGGTTAT
AAAATAGAAG GCGTTATAAG GCGGTATGAA GTAGGTGATG TTGAGATAGG CCAAGAAATA
GAGGCCGTTA TTATAAAACT AAGAGGAATT GAAAATCCAA TACTTTCCAC AAAACCCTTA
AAATCTTCGA AAGGTTTTTC TATAGCCAAA AAAGCGTTAG AACAAAAAAC ACCTATAGAT
GTTATAGTAG AATCAAAAGG AAAACCTGGA TTTTTTGTAC AACTTGAAGA TATTAGGGCT
TTGATGCCCT TTGGTGAAGC TCCAAGGCAT GTAAATATAG GAGACAAAAT AAAGGTGTTG
GTAACAAAAG CCACCTATGA AAATGGAAAA CCTATGGTAA ACGTATCTTA CAAAGAGTAT
GAGAACATTG AAAGGCATCA AAAACAACTT GAATTTATAA ACTCGTTAGA AGTAGGCTCT
ACAATAGAAG GAAAAGTAAT AAAAGTAGAC CCAGAAAAAG GTATTACAGT GCTTTTAAAA
GAAGGGGTTA GAGGCTTCGT ACCGCATTAC GAAATACCAA AAGGCACAAA TATAAAAGAA
AACGATACGT TAGAGGTTAG AGTTATTAAA AAAGCCAAAA AGGGTGATTT TCTTATATTA
AGCCTAAGAA AACCAAAGAA GAATATATGG GAAACATTGG AGCTAAAAGA AGGAGACAAA
ACAGAGGGCA AAGTATCTTT CTATAGAAAA GGGAAGGGGC TTTTCGTAGA ATTACAAGAA
GGTATTACAG CCTTAGTACC AGAAGAAAGC ATGAAAAATA TCGGCAACAA GCTTTTAAAG
AGTGGCACAA AACTAAAACT TGTTGTAACA AGAATAGACA AAGATAAAAA ACAAATAGAT
GTAAACATAG TACCTTCTGA AGAAAACCCA GCAGCGGATT TTATAAAATC AAACCCACCA
AATACGATAG TAAAGGGAAA AGTAAAAACC GTACATCCAA ACATTGCGTT TATAGAGCTA
GGACCAAACG TAGAAGGCAT AGTGAAAAAA CAAGATATGT CTTGGCTTAA AAACGCACGC
TCAGAAGAGT TGCTTACCCC TGGAGAAGAA AAAGAGTTTA TGGTACTAGG CCTAGATGGT
AAAAAAGTAA AGCTTGGCTT AAAGCAGCTT ACTCAAAATC CTTGGAGTGT AATACCAGAA
AGGTACAAAC CAGGACAACA AGTAGAGCTT GCGGTAAAAG AAGTAAGACC TTTTGGTACC
TTCTTAGGTT TGCCAGAAGG CATAGATGGC CTATTGCCAA TATCTGAAAT ACCTAAAAAC
ACAAACTTAG AGCCTGGTCA AAACATAACG GTTAAAGTTT TAGAGGTAAA TCCAAAAGAG
GAAAAAATTA CTTTCAGTAT GATACAAGAA ACCAAAAAAC AGCAAAAAGA ACAAGGCGAC
CAAAAAGAGT TTATAAAAGT AAACGACTCT TCATCTGGCT TTAAGCTTGG TGATATCCTT
AAGAACAAGT TAAAGTGA
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| Protein sequence | MVTEFEELLK AQKEQFSTGS VVKGSVVKIT DSNVYLDIGY KIEGVIRRYE VGDVEIGQEI
EAVIIKLRGI ENPILSTKPL KSSKGFSIAK KALEQKTPID VIVESKGKPG FFVQLEDIRA
LMPFGEAPRH VNIGDKIKVL VTKATYENGK PMVNVSYKEY ENIERHQKQL EFINSLEVGS
TIEGKVIKVD PEKGITVLLK EGVRGFVPHY EIPKGTNIKE NDTLEVRVIK KAKKGDFLIL
SLRKPKKNIW ETLELKEGDK TEGKVSFYRK GKGLFVELQE GITALVPEES MKNIGNKLLK
SGTKLKLVVT RIDKDKKQID VNIVPSEENP AADFIKSNPP NTIVKGKVKT VHPNIAFIEL
GPNVEGIVKK QDMSWLKNAR SEELLTPGEE KEFMVLGLDG KKVKLGLKQL TQNPWSVIPE
RYKPGQQVEL AVKEVRPFGT FLGLPEGIDG LLPISEIPKN TNLEPGQNIT VKVLEVNPKE
EKITFSMIQE TKKQQKEQGD QKEFIKVNDS SSGFKLGDIL KNKLK
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