Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0049 |
Symbol | |
ID | 6742830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | - |
Start bp | 43956 |
End bp | 45050 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 642749832 |
Product | hydrogenase expression/formation protein HypD |
Protein accession | YP_002120719 |
Protein GI | 195952429 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0409] Hydrogenase maturation factor |
TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.185682 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAATGA ACTTGAACAA TAAAGATATC GTTTTAAAAG CCAAAGACAA GCTTATAAAA AAAGTAGAAA AACTTGGAAA ACCTATCAAG CTAATGGAGT TTTGCGGTGG ACATACCCAT GCCATAATGA GATACGCTAT AGATAAGCTT CTTGATGGAT ATGTGGAGTT TATCCATGGG CCTGGTTGTC CTGTATGTGT TGCTTCTATG GATAGGATAG ATTTGGCTAT AGAACTTGCC AAGATGCCAA ATGTTATATT TACCACCTAC GGGGATCTTT TGAGAGTGCC AGGCTCTTAC AGAAAATCGC TTTTAGACAT AAGATCAGAA GGGCACGATG TAAGAAGTCT ATACTCTTGC CTTGATGCTA TCGATATAGC TGTAAAAAAC CAAGATAAGA ATGTAATATT TTTTGCCATA GGCTTTGAAA CCACCACACC ACCAACGGCA GTGCTTCTTA AAAAAGCAAA AGAGATGAAG TTAAAAAATC TTTTTGTGGT ATCAAATCAC GTGATGACTC CCCCCGCTAT TAGGTATATA CTAAACGCCG GGATATCTCA TATAGATGGC ATTATAGGAC CTGGGCATGT TAGTGTTATA ACCGGTATGA AAATATACAA AGAGTTTGAT ATACCTATTG TTATATCTGG TTTTGAGGCT TTTGATATAT TAAAAGCCGT AAACATGATA TTGGATCAAT ACATAAAACA TGAGAGAAAA GTTGAAAACG CCTACACAAG AGCTGTTACA GAAGAAGGCA ACAAAGAAGC TCAAAAGCTT ATAGAACAAA CCCTTGATAT AAGAGATACA TTTAACTGGC GAGGGATAGG TCCTTTGCCA AAAAGCGCTC TAAAAATAAA CAAAGATTAC GAGATGTTTG ATGCAGAAAA AACCTTTGAT GTAAAGTTAC CACCTTCAAA AGAGCATCCT CTTTGCATAT GTCCAAAAGT CATTGTAGGA AAAGCAAAGC CCACAGATTG CAAGCTATTT GGCAATCTTT GCACCCCAGA AAACCCTATA GGCTCTTGTA TGGTATCCTC AGAAGGAGCT TGTGCTGCTT ATTACAAATA CCAAGAGGTA GAACTATGTA TGTAA
|
Protein sequence | MKMNLNNKDI VLKAKDKLIK KVEKLGKPIK LMEFCGGHTH AIMRYAIDKL LDGYVEFIHG PGCPVCVASM DRIDLAIELA KMPNVIFTTY GDLLRVPGSY RKSLLDIRSE GHDVRSLYSC LDAIDIAVKN QDKNVIFFAI GFETTTPPTA VLLKKAKEMK LKNLFVVSNH VMTPPAIRYI LNAGISHIDG IIGPGHVSVI TGMKIYKEFD IPIVISGFEA FDILKAVNMI LDQYIKHERK VENAYTRAVT EEGNKEAQKL IEQTLDIRDT FNWRGIGPLP KSALKINKDY EMFDAEKTFD VKLPPSKEHP LCICPKVIVG KAKPTDCKLF GNLCTPENPI GSCMVSSEGA CAAYYKYQEV ELCM
|
| |