Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0036 |
Symbol | |
ID | 6742817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | - |
Start bp | 33590 |
End bp | 34489 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642749819 |
Product | 5'-3' exonuclease |
Protein accession | YP_002120706 |
Protein GI | 195952416 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.974407 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATACAA TATACGTTTT AGATGGTTCT GCATTTTTAT ATAGAAGTTA TTATGCTTTA CCTTCTTTGA AAACCGAAGA CGGCGTAGAA ACTGGTGCTT TTTATGGATT TATAAGAGCT TTATTTTCTA TATTAAAAGC TAAGAAACCA GAATATTTTG CTATAGCTTT TGATTTACCC GCCCCAACAG TTAGAGATAA GATATACAAA GAGTATAAGG CCACTAGAAA AGAAACCCCA AGCGAGCTTG TTTCACAAAT ACCCCTTATA AAACAAGCGA TAAATTTGCT TGGTATAAGG CTTTTAGAAA AAGAAGGTTT AGAAGCAGAC GATATAATAG CCTACATTGC TCATAAATCA AAAGAATGGA ATAAAAATCT TACGATTTAC ACACCAGATA AAGATTTAAT GCAGCTTGTA GAAGATAAAA AAATAATTGT AATAAACCCT ATCACCAACA AGGTGTTTGA CGAAGAAGCG GTAATAGAAA AATTTGGCGT ACCACCTTCA AGACTGGCAG ATTATCTTGC TCTTATCGGA GATAGCGTAG ACAATATAAA AGGTATAAAA GGTGTTGGTC CTAAAAAAGC TGTTGAGCTT TTAGAAAAAT ATGGTTCTAT AGAAAACATA TTAAATAACT GGGACGAAAT ACAAAAAACT TTTAAAGAGG CTTCAAAAGA GGATCTGGAG TTAGCTTACA AGCTTATTAA ATTAAACACA GAAGAGATAT TAAATATGAT AAATATACAT TTAAAAGATT TAAAAATATC TTACAATATA GACCTAAAAA AAGTAGAAGA ATTCTTTATG GCTTTTAATA TGAAAAGCTT AATAAAGGAT TTAAATACAA TATTTAAAGA AAAATCTTCA GAGAAAAGAA CTCAAAAAAC GCTTTTTTAA
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Protein sequence | MDTIYVLDGS AFLYRSYYAL PSLKTEDGVE TGAFYGFIRA LFSILKAKKP EYFAIAFDLP APTVRDKIYK EYKATRKETP SELVSQIPLI KQAINLLGIR LLEKEGLEAD DIIAYIAHKS KEWNKNLTIY TPDKDLMQLV EDKKIIVINP ITNKVFDEEA VIEKFGVPPS RLADYLALIG DSVDNIKGIK GVGPKKAVEL LEKYGSIENI LNNWDEIQKT FKEASKEDLE LAYKLIKLNT EEILNMINIH LKDLKISYNI DLKKVEEFFM AFNMKSLIKD LNTIFKEKSS EKRTQKTLF
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