Gene HY04AAS1_0020 details

Gene Information

• Locus tag: HY04AAS1_0020
• Symbol: prfB
• ID: 6742801
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Hydrogenobaculum sp. Y04AAS1
• Kingdom: Bacteria
• Replicon accession: NC_011126
• Strand: -
• Start bp: 19653
• End bp: 20780
• Gene Length: 1128 bp
• Protein Length: 375 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 642749803
• Product: peptide chain release factor 2
• Protein accession: YP_002120690
• Protein GI: 195952400
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1186] Protein chain release factor B
• TIGRFAM ID: [TIGR00020] peptide chain release factor 2

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.00724435
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTAGAAA TAGTAAGTAG CTTTTCTGAT ATAAAAAAGC GATTCGAAGA ATTGTCTTCT 
TCTATAGATG AAGAAAAGAT AAAAAAAGAA ATAGAAAAGT ACGACCAAAT GATGTCAGAA 
CCAGATTTTT GGTCCGATCA AGAAAAAGCC AAAAGCATAA GTCAAAAAAG GAAAGCTCTT 
CAAGACAAAT TAAATACTTA CACATCTCTT AAAAGCCGTA TAAAAGATTT AGATGAAATG 
GTAAGCGAAC TGAAAGAAGA AGACTTAGAT ACAACGCTAC TGATAAGCGA AGAGTTAGAA 
GCTGTAGAAA AAGATTTAAA GAAATTTGAG CTTGAGACTT ACCTTTCTGA TGAGATGGAT 
ATAAACAACG CCTATCTCAC AATACAGGCT GGGGCAGGTG GAACGGAAGC TTGCGATTGG 
GCTAGCATGC TTCTTAGAAT GTACACAAGA TGGGCAGAAA AACATGGTTA TGAAGTACAG 
CTTACAGATA TAAATCCAGA CGATGTAGCC GGTATAAAAA GCGCCACCCT TTATATAAAA 
GGACCTTATG CTTACGGTTA TTTAAAATCT GAAAACGGTG TCCATAGGCT TGTAAGGATA 
TCGCCTTTTG ATGCCAACGC CAGAAGACAT ACATCTTTTG CTTCTGTGCT TGTGGTACCA 
GAGGTTAACG AAGATGTAAA TATAGAAATA AAAGAAGAGG ACCTGAGGAT AGATACTTAT 
AGAGCCTCTG GAGCTGGTGG TCAGTATGTA AACAAAACGG ATACAGCCGT TAGAATAACT 
CATATACCAA CTGGTATAGT AGTAGCCTGT CAGCAAGAGC GCTCTCAAAT ACAAAATAGA 
AGAAAAGCTA TGGAAATGCT TAAAGCAAGA CTTTATCAGT TAGAACTTCA AAAGATAGAA 
GAAAAGAAAA AAAGCTTAGA AGGACCAAAA ACAGATATAG GATGGGGCTA TAAAATAAGA 
TCATACATAT TCCAACCATC TCAACTGGTA AAAGACTTAA GAACCGGTGA AGAATCCGGT 
AATATAGAGG CTGTAATGGA TGGCGAAATA GACAACTTTA TAGAAGCTTA CCTAAGAAAG 
AAGGCTCTAA ACCAACTTTC TTTTGACAAT CAAGAAGATG ACCAATAA 

 

Protein sequence

MVEIVSSFSD IKKRFEELSS SIDEEKIKKE IEKYDQMMSE PDFWSDQEKA KSISQKRKAL 
QDKLNTYTSL KSRIKDLDEM VSELKEEDLD TTLLISEELE AVEKDLKKFE LETYLSDEMD 
INNAYLTIQA GAGGTEACDW ASMLLRMYTR WAEKHGYEVQ LTDINPDDVA GIKSATLYIK 
GPYAYGYLKS ENGVHRLVRI SPFDANARRH TSFASVLVVP EVNEDVNIEI KEEDLRIDTY 
RASGAGGQYV NKTDTAVRIT HIPTGIVVAC QQERSQIQNR RKAMEMLKAR LYQLELQKIE 
EKKKSLEGPK TDIGWGYKIR SYIFQPSQLV KDLRTGEESG NIEAVMDGEI DNFIEAYLRK 
KALNQLSFDN QEDDQ