| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0008 |
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| Symbol | |
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| ID | 6742786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | - |
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| Start bp | 7588 |
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| End bp | 8679 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 642749788 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_002120678 |
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| Protein GI | 195952388 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0000302217 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACAA AAACAAAAAT TTTGATAGCT TTAGCTATTC TTGGTATCAT AGCAGGTATT
ATAAGCGCTC ACATATACGG ATCAGCTCCA AAACCACCGC CACCTGTATA TATGACAAAA
GACCCTTTTA AAAATGGCGT TTATGCAAAC GGCATTATAG AACCAGTACA AGCCAGTGGG
GAGAGCATAA ATGTATACCC TGAGGTATCT GGAAATGTAA CAAAGGTTTT TGTAAAATAC
GGTGAGTTTG TGCAAAAAGG ACAACCGCTT TTCCAAGTGG ATGACAGCGT ACAAGCCCAA
ACGGTCAAAC AGCTTTACCA TCAAGTGCAA GCAGACTATA CAAAATATCA AGAGCTTTTA
CACGAACCAA GACCCCAAGT TTTGGCCGTT TCAAAGGCTC AAGTAGATTA CGCCAAAGCG
CAGCTTGCTT ATGCCCAGTC AAACTATAAA AAGCTTTTAA ACTCTTATAA ACTAAACCCA
AAATCTGTAT CAAAACAAGA TTTAGATAAC GCAAAAAACG CTTTAAAAGA AGCAAAAGAA
AATCTTAAAG TGGCAATTAA AAATTATGAA CTCACAAAGG CGGGAGCATG GAGTTATGAT
ATAAACACCC AGTATCAACT TTACAAAGCC GATAAGCATG CTTACCAAAG TGCTTTGGAA
CTTTTAAAAA GATATACGGT AAAAGCGCCG GTATCTGGAA CTGTTTTAGA GCTAAACGTG
GAAAAAGGGG ACTATGTATC ACCTTCTGGT GTTTATTATA CTTATACACA TTCTTACGTT
ACACCTGTAA GACTTGGTCA AAGCTCCAAT GGAGAGCTTC AAGTTAGAGC ATTTATAGAT
GAAATACTTC TTGCAAAACT ACCACCTATA AAAGACTTAA AGGCCGTTAT GTTTATAAGA
GGTACCAACA TATCTGTGCC CCTCAAATTT GTAGCGGTAG AACCTTATGT AACACCTAAG
ATAGAACTAT CGGATGAGCT ACTAGAAAGA GTAGACGTAA GAGTTCTACC TGTAATATTT
AGATTTAAAA AGCCTAAAAA CGTAAACCTC TACCCAGGAC AGCTTGTAGA CATATATTTA
GAGGGCAAAT AA
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| Protein sequence | MNTKTKILIA LAILGIIAGI ISAHIYGSAP KPPPPVYMTK DPFKNGVYAN GIIEPVQASG
ESINVYPEVS GNVTKVFVKY GEFVQKGQPL FQVDDSVQAQ TVKQLYHQVQ ADYTKYQELL
HEPRPQVLAV SKAQVDYAKA QLAYAQSNYK KLLNSYKLNP KSVSKQDLDN AKNALKEAKE
NLKVAIKNYE LTKAGAWSYD INTQYQLYKA DKHAYQSALE LLKRYTVKAP VSGTVLELNV
EKGDYVSPSG VYYTYTHSYV TPVRLGQSSN GELQVRAFID EILLAKLPPI KDLKAVMFIR
GTNISVPLKF VAVEPYVTPK IELSDELLER VDVRVLPVIF RFKKPKNVNL YPGQLVDIYL
EGK
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