Gene SeSA_A4734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4734 
Symbol 
ID6518513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp4598384 
End bp4599484 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content55% 
IMG OID642749666 
Productputative permease 
Protein accessionYP_002117399 
Protein GI194736994 
COG category[R] General function prediction only 
COG ID[COG0795] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.0000385303 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.325053 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATAATCA TAAGATATCT GGTGCGGGAG ACGCTCAAAA GCCAGCTGGC GATACTCTTC 
ATCTTACTTT TGATCTTCTT TTGTCAAAAG TTAGTGAGGA TTCTCGGCGC GGCGGTTGAC 
GGCGATATTC CCGCAAATCT GGTGCTCTCG CTTCTGGGGC TGGGCGTACC GGAAATGGCG 
CAGCTCATCC TGCCTTTAAG CCTGTTCCTG GGGCTGCTGA TGACGCTGGG CAAACTGTAT 
ACCGAAAGTG AAATTACGGT CATGCACGCC TGTGGGTTGA GCAAAGCCGT GCTGGTAAAG 
GCCGCCATGG TACTGGCGTT ATTTACCGGT ATCCTTGCGG CGGTTAACGT GATGTGGGCC 
GGTCCCTGGT CGTCAAAACA CCAGGATGAA GTGCTGGCGG AGGCGAAAGC GAACCCCGGT 
ATGGCGGCGC TGGCGCAGGG GCAATTCCAG CAGGCGACCA ACGGCAGCTC GGTGCTGTTT 
ATCGAAAGCG TTGATGGCAG CGACTTCCAC GATGTTTTCC TGGCGCAGAT TCGCCCTAAG 
GGCAATGCTC GTCCTTCTGT GGTAGTGGCT GATTCCGGAC ACCTTACTCA GTTGCGCGAT 
GGTTCCCAGG TTGTCACCTT AAACAAAGGG ACACGTTTTG AAGGAACGGC GTTGCTACGC 
GATTTTCGCA TCACCGACTT CCAGAACTAT CAGGCGATTA TTGGCCATCA GGCCGTGGCG 
CTGGACCCGA ACGATACCGA CCAGATGGAC ATGCGCACGC TGTGGAATAC CGACAACGAT 
CGCGCTCGCG CCGAGCTGCA CTGGCGTATC ACGTTAGTCT TTACCGTATT TATGATGGCG 
CTGATGGTCG TGCCGCTCAG CGTGGTGAAT CCACGTCAGG GGCGCGTCTT GTCTATGTTG 
CCCGCCATGC TGCTTTATCT GCTGTTCTTC CTGATCCAGA CCTCCATTAA ATCGAATGGC 
GGTAAAGGCA AACTGGACCC GGTTATCTGG ATGTGGGCGG TCAACCTGAT CTATCTGGCG 
TTGGCGATTG GTTTAAACCT GTGGGATACG GTGCCGGTCC GCCGCCTGCG TGCCCGTTTT 
CTGCGTAAAG GAGCGGTATA A
 
Protein sequence
MIIIRYLVRE TLKSQLAILF ILLLIFFCQK LVRILGAAVD GDIPANLVLS LLGLGVPEMA 
QLILPLSLFL GLLMTLGKLY TESEITVMHA CGLSKAVLVK AAMVLALFTG ILAAVNVMWA 
GPWSSKHQDE VLAEAKANPG MAALAQGQFQ QATNGSSVLF IESVDGSDFH DVFLAQIRPK 
GNARPSVVVA DSGHLTQLRD GSQVVTLNKG TRFEGTALLR DFRITDFQNY QAIIGHQAVA 
LDPNDTDQMD MRTLWNTDND RARAELHWRI TLVFTVFMMA LMVVPLSVVN PRQGRVLSML 
PAMLLYLLFF LIQTSIKSNG GKGKLDPVIW MWAVNLIYLA LAIGLNLWDT VPVRRLRARF 
LRKGAV