| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A4731 |
|---|
| Symbol | valS |
|---|
| ID | 6515877 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | - |
|---|
| Start bp | 4593043 |
|---|
| End bp | 4595898 |
|---|
| Gene Length | 2856 bp |
|---|
| Protein Length | 951 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642749663 |
|---|
| Product | valyl-tRNA synthetase |
|---|
| Protein accession | YP_002117396 |
|---|
| Protein GI | 194735911 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0525] Valyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.342203 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAGA CATATAACCC CCAAGATATC GAACAGCCGC TTTACGAGCA CTGGGAAAAG
CAGGGCTATT TCAAGCCTAA CGGCGACGAA AGCAAAGAGT CCTTCTGCAT CATGATCCCG
CCGCCGAACG TCACCGGCAG TTTGCATATG GGACATGCTT TCCAGCAAAC CATCATGGAT
ACCATGATCC GTTACCAGCG TATGCAGGGT AAAAACACCC TGTGGCAGGT CGGCACCGAC
CACGCCGGGA TCGCGACCCA GATGGTGGTT GAGCGCAAGA TTGCCGCTGA AGAAGGTAAA
ACCCGTCACG ACTACGGCCG CGATGCGTTT ATCGACAAAA TCTGGCAGTG GAAAGCGGAA
TCCGGCGGCA CCATTACCCG TCAGATGCGC CGTCTCGGCA ACTCCGTTGA CTGGGAGCGC
GAGCGCTTCA CCATGGACGA AGGCCTTTCC AATGCCGTGA AAGAAGTCTT TGTTCGCCTG
TACAAAGAAG ACCTGATTTA CCGTGGCAAA CGCCTGGTGA ACTGGGACCC GAAACTGCGT
ACCGCCATCT CTGACCTGGA AGTGGAAAAC CGCGAGTCCA AAGGCTCGAT GTGGCACATC
CGCTATCCGC TTGCCGACGG CGCGAAAACC GCAGACGGTA AAGATTACCT GGTCGTCGCC
ACCACCCGTC CGGAAACCGT ACTGGGCGAT ACCGGCGTGG CCGTGAACCC GGAAGATCCG
CGTTATAAAG ATCTGATTGG CAAATTCGTT ATTCTGCCGC TGGTTAACCG CCGCATTCCG
ATTGTGGGCG ACGAACACGC CGATATGGAA AAAGGCACCG GCTGCGTAAA AATCACCCCG
GCGCACGACT TTAACGACTA TGAAGTCGGG AAACGTCACG CCCTGCCGAT GATCAACATC
CTGACCTTTG ACGGCGACAT TCGCGAAAGC GCGGAAGTGT TCGATACCAA AGGTGAAGAG
TCTGACGTTT ATTCCAGCGA GATTCCGGCT GAGTTCCAGA AGCTGGAACG CTTTGCTGCC
CGTAAGGCCA TCGTTGCTGC CGTTGACGCG CTCGGCCTGC TGGAAGAAAT TAAACCGCAC
GATCTGACCG TCCCTTACGG CGACCGTGGC GGCGTGGTTA TCGAACCGAT GCTGACCGAC
CAGTGGTACG TCCGTGCCGA CGTGCTGGCG AAACCGGCGG TGGAAGCGGT TGAAAACGGC
GACATTCAGT TCGTACCGAA GCAGTACGAA AACATGTATT TCTCCTGGAT GCGCGATATC
CAGGACTGGT GTATCTCTCG TCAACTGTGG TGGGGTCACC GTATCCCGGC ATGGTATGAC
AACGACGGCA ACGTCTACGT TGGCCGTACC GAAGACGAAG TGCGTCAGGA AAATAACCTC
GGTGCCGACG TTCAGCTTCG TCAGGACGAA GACGTTCTCG ATACCTGGTT CTCCTCCGCG
CTGTGGACCT TTTCTACGCT GGGCTGGCCG GAAAACACCG ACGCGCTGCG TCAGTTCCAC
CCCACCAGCG TGATGGTGTC CGGCTTCGAT ATCATCTTCT TCTGGATTGC CCGCATGATC
ATGATGACCA TGCACTTCAT CAAAGATGAA AACGGCAAGC CGCAGGTGCC GTTCCATACT
GTCTACATGA CCGGTCTGAT TCGCGACGAC GAAGGCCAGA AGATGTCTAA ATCCAAGGGT
AACGTTATCG ACCCGCTGGA TATGGTGGAC GGCATCTCCC TGCCGGAACT GCTGGAAAAA
CGCACCGGCA ACATGATGCA GCCGCAGATG GCGGAGAAAA TCCGCAAGCG TACCGAGAAG
CAGTTCCCGA ACGGCATCGA GCCGCACGGC ACCGACGCCC TGCGCTTTAC CCTGGCGGCG
CTGGCCTCGA CCGGCCGCGA CATCAACTGG GATATGAAGC GTCTGGAAGG TTACCGTAAC
TTCTGTAACA AGCTGTGGAA CGCCAGCCGC TTTGTGCTGA TGAACACCGA AGAGCAGGAT
TGCGGCTTCA ACGGCGGTGA AATGACGCTG TCGCTGGCGG ACCGCTGGAT CCTGGCGGAA
TTCAACCAGA CCGTTAAAGC GTACCGCGAC GCGCTGGACA GCTTCCGCTT CGATATCGCC
GCGGGCATTC TGTACGAGTT CACCTGGAAC CAGTTCTGTG ACTGGTATCT GGAGCTGACC
AAGCCGGTAA TGAACGGTGG CACCGAAGCC GAACTGCGCG GCACCCGCCA TACGCTGGTC
ACCGTACTGG AAGGTCTGCT GCGCCTGGCG CACCCGATCA TCCCGTTCAT CACCGAAACC
ATCTGGCAGC GCGTGAAGGT TATCTGTGGC ATTACCGCCG ACACCATCAT GCTACAGCCG
TTCCCGGAAT ATAACGCCGC ACAGGTGGAT GAAGCCGCGT TGGCCGATAC CGAGTGGCTG
AAGCAGGCGA TCGTCGCCGT ACGTAACATT CGTGCGGAAA TGAACATCGC CCCGGGCAAA
CCGCTGGAAC TGCTGCTGCG CGGCTGTAGT GAAGAAGCCG TTCGTCGTGT TAACGACAAC
CGTAGCTTCC TGCAAACCCT GGCGCGTCTG GAAAGCATCA CCGTGCTGCC AGCCGATGAC
AAAGGTCCGG TTTCCGTGAC CAAAATCATC GACGGCGCCG AACTGCTGAT CCCGATGGCA
GGCCTCATCA ACAAAGACGA TGAGCTGGCG CGTCTGGCGA AAGAAGTGGC GAAAATCGAA
GGCGAGATTG CCCGTATCGA AGGCAAACTG TCCAACGAAG GTTTCGTCGC CCGTGCGCCG
GAAGCGGTGA TTGCCAAAGA GCGTGAGAAG CTGGACGGTT ACGCAGAAGC CAAAGCGAAG
CTGATTGAGC AGCAGGCGGT TATTAGCGCG CTGTAA
|
|---|
| Protein sequence | MEKTYNPQDI EQPLYEHWEK QGYFKPNGDE SKESFCIMIP PPNVTGSLHM GHAFQQTIMD
TMIRYQRMQG KNTLWQVGTD HAGIATQMVV ERKIAAEEGK TRHDYGRDAF IDKIWQWKAE
SGGTITRQMR RLGNSVDWER ERFTMDEGLS NAVKEVFVRL YKEDLIYRGK RLVNWDPKLR
TAISDLEVEN RESKGSMWHI RYPLADGAKT ADGKDYLVVA TTRPETVLGD TGVAVNPEDP
RYKDLIGKFV ILPLVNRRIP IVGDEHADME KGTGCVKITP AHDFNDYEVG KRHALPMINI
LTFDGDIRES AEVFDTKGEE SDVYSSEIPA EFQKLERFAA RKAIVAAVDA LGLLEEIKPH
DLTVPYGDRG GVVIEPMLTD QWYVRADVLA KPAVEAVENG DIQFVPKQYE NMYFSWMRDI
QDWCISRQLW WGHRIPAWYD NDGNVYVGRT EDEVRQENNL GADVQLRQDE DVLDTWFSSA
LWTFSTLGWP ENTDALRQFH PTSVMVSGFD IIFFWIARMI MMTMHFIKDE NGKPQVPFHT
VYMTGLIRDD EGQKMSKSKG NVIDPLDMVD GISLPELLEK RTGNMMQPQM AEKIRKRTEK
QFPNGIEPHG TDALRFTLAA LASTGRDINW DMKRLEGYRN FCNKLWNASR FVLMNTEEQD
CGFNGGEMTL SLADRWILAE FNQTVKAYRD ALDSFRFDIA AGILYEFTWN QFCDWYLELT
KPVMNGGTEA ELRGTRHTLV TVLEGLLRLA HPIIPFITET IWQRVKVICG ITADTIMLQP
FPEYNAAQVD EAALADTEWL KQAIVAVRNI RAEMNIAPGK PLELLLRGCS EEAVRRVNDN
RSFLQTLARL ESITVLPADD KGPVSVTKII DGAELLIPMA GLINKDDELA RLAKEVAKIE
GEIARIEGKL SNEGFVARAP EAVIAKEREK LDGYAEAKAK LIEQQAVISA L
|
|---|
| |