Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A4731 |
Symbol | valS |
ID | 6515877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 4593043 |
End bp | 4595898 |
Gene Length | 2856 bp |
Protein Length | 951 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642749663 |
Product | valyl-tRNA synthetase |
Protein accession | YP_002117396 |
Protein GI | 194735911 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0525] Valyl-tRNA synthetase |
TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.342203 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAGA CATATAACCC CCAAGATATC GAACAGCCGC TTTACGAGCA CTGGGAAAAG CAGGGCTATT TCAAGCCTAA CGGCGACGAA AGCAAAGAGT CCTTCTGCAT CATGATCCCG CCGCCGAACG TCACCGGCAG TTTGCATATG GGACATGCTT TCCAGCAAAC CATCATGGAT ACCATGATCC GTTACCAGCG TATGCAGGGT AAAAACACCC TGTGGCAGGT CGGCACCGAC CACGCCGGGA TCGCGACCCA GATGGTGGTT GAGCGCAAGA TTGCCGCTGA AGAAGGTAAA ACCCGTCACG ACTACGGCCG CGATGCGTTT ATCGACAAAA TCTGGCAGTG GAAAGCGGAA TCCGGCGGCA CCATTACCCG TCAGATGCGC CGTCTCGGCA ACTCCGTTGA CTGGGAGCGC GAGCGCTTCA CCATGGACGA AGGCCTTTCC AATGCCGTGA AAGAAGTCTT TGTTCGCCTG TACAAAGAAG ACCTGATTTA CCGTGGCAAA CGCCTGGTGA ACTGGGACCC GAAACTGCGT ACCGCCATCT CTGACCTGGA AGTGGAAAAC CGCGAGTCCA AAGGCTCGAT GTGGCACATC CGCTATCCGC TTGCCGACGG CGCGAAAACC GCAGACGGTA AAGATTACCT GGTCGTCGCC ACCACCCGTC CGGAAACCGT ACTGGGCGAT ACCGGCGTGG CCGTGAACCC GGAAGATCCG CGTTATAAAG ATCTGATTGG CAAATTCGTT ATTCTGCCGC TGGTTAACCG CCGCATTCCG ATTGTGGGCG ACGAACACGC CGATATGGAA AAAGGCACCG GCTGCGTAAA AATCACCCCG GCGCACGACT TTAACGACTA TGAAGTCGGG AAACGTCACG CCCTGCCGAT GATCAACATC CTGACCTTTG ACGGCGACAT TCGCGAAAGC GCGGAAGTGT TCGATACCAA AGGTGAAGAG TCTGACGTTT ATTCCAGCGA GATTCCGGCT GAGTTCCAGA AGCTGGAACG CTTTGCTGCC CGTAAGGCCA TCGTTGCTGC CGTTGACGCG CTCGGCCTGC TGGAAGAAAT TAAACCGCAC GATCTGACCG TCCCTTACGG CGACCGTGGC GGCGTGGTTA TCGAACCGAT GCTGACCGAC CAGTGGTACG TCCGTGCCGA CGTGCTGGCG AAACCGGCGG TGGAAGCGGT TGAAAACGGC GACATTCAGT TCGTACCGAA GCAGTACGAA AACATGTATT TCTCCTGGAT GCGCGATATC CAGGACTGGT GTATCTCTCG TCAACTGTGG TGGGGTCACC GTATCCCGGC ATGGTATGAC AACGACGGCA ACGTCTACGT TGGCCGTACC GAAGACGAAG TGCGTCAGGA AAATAACCTC GGTGCCGACG TTCAGCTTCG TCAGGACGAA GACGTTCTCG ATACCTGGTT CTCCTCCGCG CTGTGGACCT TTTCTACGCT GGGCTGGCCG GAAAACACCG ACGCGCTGCG TCAGTTCCAC CCCACCAGCG TGATGGTGTC CGGCTTCGAT ATCATCTTCT TCTGGATTGC CCGCATGATC ATGATGACCA TGCACTTCAT CAAAGATGAA AACGGCAAGC CGCAGGTGCC GTTCCATACT GTCTACATGA CCGGTCTGAT TCGCGACGAC GAAGGCCAGA AGATGTCTAA ATCCAAGGGT AACGTTATCG ACCCGCTGGA TATGGTGGAC GGCATCTCCC TGCCGGAACT GCTGGAAAAA CGCACCGGCA ACATGATGCA GCCGCAGATG GCGGAGAAAA TCCGCAAGCG TACCGAGAAG CAGTTCCCGA ACGGCATCGA GCCGCACGGC ACCGACGCCC TGCGCTTTAC CCTGGCGGCG CTGGCCTCGA CCGGCCGCGA CATCAACTGG GATATGAAGC GTCTGGAAGG TTACCGTAAC TTCTGTAACA AGCTGTGGAA CGCCAGCCGC TTTGTGCTGA TGAACACCGA AGAGCAGGAT TGCGGCTTCA ACGGCGGTGA AATGACGCTG TCGCTGGCGG ACCGCTGGAT CCTGGCGGAA TTCAACCAGA CCGTTAAAGC GTACCGCGAC GCGCTGGACA GCTTCCGCTT CGATATCGCC GCGGGCATTC TGTACGAGTT CACCTGGAAC CAGTTCTGTG ACTGGTATCT GGAGCTGACC AAGCCGGTAA TGAACGGTGG CACCGAAGCC GAACTGCGCG GCACCCGCCA TACGCTGGTC ACCGTACTGG AAGGTCTGCT GCGCCTGGCG CACCCGATCA TCCCGTTCAT CACCGAAACC ATCTGGCAGC GCGTGAAGGT TATCTGTGGC ATTACCGCCG ACACCATCAT GCTACAGCCG TTCCCGGAAT ATAACGCCGC ACAGGTGGAT GAAGCCGCGT TGGCCGATAC CGAGTGGCTG AAGCAGGCGA TCGTCGCCGT ACGTAACATT CGTGCGGAAA TGAACATCGC CCCGGGCAAA CCGCTGGAAC TGCTGCTGCG CGGCTGTAGT GAAGAAGCCG TTCGTCGTGT TAACGACAAC CGTAGCTTCC TGCAAACCCT GGCGCGTCTG GAAAGCATCA CCGTGCTGCC AGCCGATGAC AAAGGTCCGG TTTCCGTGAC CAAAATCATC GACGGCGCCG AACTGCTGAT CCCGATGGCA GGCCTCATCA ACAAAGACGA TGAGCTGGCG CGTCTGGCGA AAGAAGTGGC GAAAATCGAA GGCGAGATTG CCCGTATCGA AGGCAAACTG TCCAACGAAG GTTTCGTCGC CCGTGCGCCG GAAGCGGTGA TTGCCAAAGA GCGTGAGAAG CTGGACGGTT ACGCAGAAGC CAAAGCGAAG CTGATTGAGC AGCAGGCGGT TATTAGCGCG CTGTAA
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Protein sequence | MEKTYNPQDI EQPLYEHWEK QGYFKPNGDE SKESFCIMIP PPNVTGSLHM GHAFQQTIMD TMIRYQRMQG KNTLWQVGTD HAGIATQMVV ERKIAAEEGK TRHDYGRDAF IDKIWQWKAE SGGTITRQMR RLGNSVDWER ERFTMDEGLS NAVKEVFVRL YKEDLIYRGK RLVNWDPKLR TAISDLEVEN RESKGSMWHI RYPLADGAKT ADGKDYLVVA TTRPETVLGD TGVAVNPEDP RYKDLIGKFV ILPLVNRRIP IVGDEHADME KGTGCVKITP AHDFNDYEVG KRHALPMINI LTFDGDIRES AEVFDTKGEE SDVYSSEIPA EFQKLERFAA RKAIVAAVDA LGLLEEIKPH DLTVPYGDRG GVVIEPMLTD QWYVRADVLA KPAVEAVENG DIQFVPKQYE NMYFSWMRDI QDWCISRQLW WGHRIPAWYD NDGNVYVGRT EDEVRQENNL GADVQLRQDE DVLDTWFSSA LWTFSTLGWP ENTDALRQFH PTSVMVSGFD IIFFWIARMI MMTMHFIKDE NGKPQVPFHT VYMTGLIRDD EGQKMSKSKG NVIDPLDMVD GISLPELLEK RTGNMMQPQM AEKIRKRTEK QFPNGIEPHG TDALRFTLAA LASTGRDINW DMKRLEGYRN FCNKLWNASR FVLMNTEEQD CGFNGGEMTL SLADRWILAE FNQTVKAYRD ALDSFRFDIA AGILYEFTWN QFCDWYLELT KPVMNGGTEA ELRGTRHTLV TVLEGLLRLA HPIIPFITET IWQRVKVICG ITADTIMLQP FPEYNAAQVD EAALADTEWL KQAIVAVRNI RAEMNIAPGK PLELLLRGCS EEAVRRVNDN RSFLQTLARL ESITVLPADD KGPVSVTKII DGAELLIPMA GLINKDDELA RLAKEVAKIE GEIARIEGKL SNEGFVARAP EAVIAKEREK LDGYAEAKAK LIEQQAVISA L
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