Gene SeSA_A4686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4686 
Symbolmpl 
ID6518297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp4555617 
End bp4556990 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content58% 
IMG OID642749623 
ProductUDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 
Protein accessionYP_002117356 
Protein GI194736211 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0773] UDP-N-acetylmuramate-alanine ligase 
TIGRFAM ID[TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.383039 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.37193 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATTC ATATTTTGGG AATTTGTGGC ACTTTCATGG GGGGGCTGGC GATGCTGGCT 
CGCTCGCTTG GTCATGAAGT AACGGGTTCG GACGCCAATG TGTATCCGCC GATGAGTACC
TTACTTGAGA AGCAAGGCAT TGATCTGATC CAGGGTTATG ACGCCAGCCA GCTCGATCCG
CAGCCGGATC TGGTGATTAT CGGCAATGCG ATGACGCGCG GGAATCCGTG CGTGGAAGCG
GTGCTGGAAA AAAACATTCC CTTTATGTCT GGTCCACAGT GGCTGCACGA CTTTGTGTTG
CGCGATCGCT GGGTACTGGC GGTCGCCGGT ACCCACGGCA AAACCACGAC CGCAGGCATG
GCGACCTGGA TACTGGAAGC GTGCGGGTAC AAACCGGGCT TTGTGATTGG CGGCGTACCG
GGTAACTTTG AGGTTTCCGC GCGCCTGGGC GAGAGCCCGT TCTTTGTTAT CGAAGCGGAT
GAGTACGACT GCGCGTTCTT TGATAAACGT TCTAAATTTG TGCATTACTG CCCGCGGACG
CTGATCCTCA ACAACCTTGA GTTTGATCAT GCCGACATCT TCGACGATCT GAAAGCGATC
CAGAAGCAGT TCCACCATCT GGTGCGCATC GTACCGGGGC AGGGGCGCAT CATCTGGCCG
GAAAACGACA TCAACCTGAA ACAGACCATG GCGCTGGGCT GCTGGAGCGA GCAGGAGCTG
GTGGGCGAGC AGGGACACTG GCAGGCGAAG AAGCTGACTA CGGATGCTTC CGAGTGGGAA
GTGTGGCTGG ACGGCGAAAA AGTCGGCGAT GTGAAATGGG GCCTGGTCGG CGAACATAAC
ATGCACAACG GTCTGATGGC GATTGCCGCC GCGCGCCACG TGGGCGTCGC GCCCGCAGAA
GCGGCCAGTG CTCTGGGGTC ATTTATTAAC GCCCGCCGCC GTCTGGAACT GCGCGGTGAA
GCGAACGGCG TGACGGTGTA TGACGATTTT GCTCATCACC CGACGGCAAT TCTGGCCACG
CTGGCGGCGC TGCGCGGTAA AGTGGGCGGC ACCGCGCGCA TTATCGCAGT GCTGGAGCCG
CGTTCTAACA CGATGAAGAT GGGGTTATGC AAGGATGACC TGGCACCGTC GTTAGGGCGT
GCGGATGAAG TGTTCCTGCT GCAGCCGCCG CATATTCCGT GGCAAGTGGC GGAAGTCGCT
GAAGCCTGCG TACAGCCTGC TCACTGGAGT GGCGATGTCG ATACGCTGGC GGAAATGGTG
GTGAAAACCG CACAGCCTGG CGATCACATC CTGGTGATGA GCAACGGCGG TTTCGGCGGC
ATCCATCAGA AATTGCTGGA TGGGCTGGCG AAAAAAGCAC TGGTTGTGGA GTAA
 
Protein sequence
MRIHILGICG TFMGGLAMLA RSLGHEVTGS DANVYPPMST LLEKQGIDLI QGYDASQLDP 
QPDLVIIGNA MTRGNPCVEA VLEKNIPFMS GPQWLHDFVL RDRWVLAVAG THGKTTTAGM
ATWILEACGY KPGFVIGGVP GNFEVSARLG ESPFFVIEAD EYDCAFFDKR SKFVHYCPRT
LILNNLEFDH ADIFDDLKAI QKQFHHLVRI VPGQGRIIWP ENDINLKQTM ALGCWSEQEL
VGEQGHWQAK KLTTDASEWE VWLDGEKVGD VKWGLVGEHN MHNGLMAIAA ARHVGVAPAE
AASALGSFIN ARRRLELRGE ANGVTVYDDF AHHPTAILAT LAALRGKVGG TARIIAVLEP
RSNTMKMGLC KDDLAPSLGR ADEVFLLQPP HIPWQVAEVA EACVQPAHWS GDVDTLAEMV
VKTAQPGDHI LVMSNGGFGG IHQKLLDGLA KKALVVE