Gene SeSA_A4616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4616 
Symbol 
ID6518163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp4488748 
End bp4492074 
Gene Length3327 bp 
Protein Length1108 aa 
Translation table11 
GC content57% 
IMG OID642749556 
Producthypothetical protein 
Protein accessionYP_002117291 
Protein GI194734787 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3264] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.115019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCTGA TTATCGCTTT TCTGATGGCC TGGTGCCTCA GCACGGGGGC GTTCGCCGCA 
ACGGCCCCCG ACGCCAAACA AATCACGCAG GAACTGGAGC AGGCAAAAGC GGCGAAGCCC
GCTCAGCCGG AAGCCGTTGA GGCGCTCCAG ACTGCGTTAA ACGCGCTTGA AGAGCGAAAA
GGCTCGCTTG AGCGTGCGAA ACAATATCAA CACGTTATTG ATAATTTCCC TAAGCTATCC
GCCACCTTGC GCGCCCAGTT GAATAATCTG CGCGATGAAC CTCGCAGCGT ACCGCCAGAG
ATGTCCACCG AAGCGTTAAA TCAGGAGATC TTGCAGGTTA GCAGCCAGCT ACTGGATAAA
ACCCGCGAGG CGCAACAGGA GCAGGAGCGC GTCAGGGAGA TCGCCGACTC GCTCAGCCAG
CTTCCCCAAC AGCAAAACGA TGCCCGCCGC CAGCTTAATG AGATTGAGCG ACGGCTCGGC
GCCGCAGGCG GAAGTGCCGC GCTTAGCCAG GCGCAAAGTC TCAGTATGCA GGCGGAGTCC
GCCAAACTAA AAGCGTTAGT CGACGAACTG GAGTTGGCGC AACTGTCCGC CAACAACCGG
CAGGAACTGG CTCGTCTGCG TTCCGAGCTG GCGGAAAAAC AGAGTCAGCA ATTGGATGCG
TATCTTCAGG CGCTGCGCAA TCAGCTCAAT AGCCTGCGTC AACGTGAAGC GGAACGCGCG
CTGGAAAGCA CTGAGCTGCT GGCGGAAAAC AGCGCCGGTT TGCCGGAAGG CATCGTCGAA
CAATTTAAAG TCAACCGCGA GCTGTCACAG GCACTCAATC AACAAGCGCA GCGGATGGAT
CTGGTCGCCT CGCAGCAGCG ACAGGCTACC AGCCAAACGT TACAGGTGCG CCAGGCGCTC
AATACGCTGC GGGAGCAGTC GCAATGGCTT GGCGTGTCCA ACATGCTTGG CGAAGCGCTG
CGCGCGCAGG TCGCCCGTCT GCCAGAGATG CCTAAGCCGC AGCAGCTTGA TACGGAAATG
GCGCAGCTAC GCGTCCACCG TATGCGCTAT GAAGAGTTAC TCAATAAGCA GCCGCAGCTA
CGGCAAATAC GTCAGGCCAA TGGACAGCCG CTGACCGCCG AGCAAAACCA GATCCTTGAC
GCCCAGCTTC GCACTCAGCG CGAGCTGCTC AACTCTTTGT TACAGGGCGG CGACACGCTG
ATCCTGGAGC TGACCAAACT GAAAGTCTCC AACAGCCAAC TGGAGGATGC GCTTAAAGAG
GTTAATGAAG CGACCCACCG TTATCTTTTC TGGACCGCTG ACGTTAGCCC GCTATCGCTC
TCCTGGCCTG TTGATTTGGT TCAGGATTTA CGCCGGCTTA TCTCATTAGA TACGTTTAAT
CAGTTAGGTA AAGCCAGCAT CATGATGCTG ACCAGCAAAG AGACGCTACT GCCGTTATTC
GGCGCGCTGG CGCTGGTCGG GTTTAGCCTC TATTCACGCC AACACTTCAA CCGGTTCCTT
GAGCGCTCGG CCTCGCGCGT CGGGAAAGTC ACCCAGGATC ACTTCTCGCT GACGCTGCGA
ACGGTGTTCT GGTCGATTCT GGTCGCCTCG CCGCTGCCGG TCTTGTGGGC GACGCTCGGC
TATGGTCTAC AGGAAGCCTG GCCGTATCCG CTGGCCGTCG CCATCGGCGA TGGCGTGACG
GCGACAGTAC CGCTGTTGTG GGTAGTCATG ATTTGCGCCG CGTTTGCCCG CCCTAATGGC
CTGTTTGTGG CGCATTTTGG CTGGCCGCGA AACCGGGTAG CGAAAGCGAT GCGCTACTAC
CTGATGAGCA TTGGGCTGAT CGTGCCGCTC ATCATGGCAG TGATCATGTT TGATAATCTT
AACGATCGGG AGTTTTCCGG CTCGTTGGGC CGCCTTTGCT TCATCCTGAT ATGCGGCGCG
CTGGCGCTGG TCACGCTGAG TCTGAAAAAA GCGGGCATCC CGCTCTATCT TGATAAAGAA
GGCAACGGCG ACAACATGGT CAACAGCCTG CTGTGGAATA TGTTGATGGG CGCGCCGCTT
ATCGCGATTC TGGCAGCGGC AGTGGGTTAT CTGGCCACGG CGCAGGCGCT ACTGGCGAGA
CTGGAAACCT CGGTCGCCAT CTGGTTCCTG TTGCTGGTCA TTTATCACGT CATTCGCCGC
TGGATGCTGA TCCAACGACG CCGACTGGCT TTTGACCGCG CCAAACATCG TCGGGCGGAA
ATGCTGGCGC AGCGCGCGCG CGGCGAAGAA GAACCGGCGC ATTCCTCCAG CCTGGAAGGC
GCGGTCGACA TCGATGAAAG TGAAATCGAT CTTGACGCTA TTAGCGCTCA GTCGCTGCGT
CTGGTCCGCT CAATTCTGAT GCTTATCGCC CTACTATCGG TAATTGTACT GTGGTCGGAA
ATTCACTCGG CATTCGGCTT CCTGGAGAAT ATTTCGCTGT GGGATGTCAC CTCTACGGTG
CAAGGCGTGG AAAGCCTGGA GCCGATTACC CTCGGGGCGG TGCTCATTGC GATTCTGGTC
TTTATCATAA CCACGCAGTT GGTGCGTAAT CTGCCTGCGC TGCTGGAACT GGCGTTATTA
CAGCATCTCG ATTTAACGCC TGGTACCGGT TACGCCATCA CGACCATCAC CAAATATTTG
TTAATGCTGA TTGGCGGGCT GGTCGGTTTC TCGATGATCG GCATTGAGTG GTCGAAGCTA
CAATGGCTGG TGGCCGCGCT CGGCGTTGGG CTTGGTTTTG GCCTGCAAGA AATTTTCGCT
AACTTTATCT CCGGCCTGAT TATTTTGTTT GAAAAGCCGA TTCGTATCGG CGATACGGTG
ACCATTCGCG ATCTCACCGG CAGCGTGACC AAAATCAATA CCCGCGCCAC CACCATCAGC
GACTGGGATC GTAAAGAGAT TATCGTGCCG AATAAAGCCT TTATCACCGA ACAGTTTATC
AACTGGTCGC TGTCTGACTC CGTTACGCGC GTGGTGTTAA CCATCCCGGC GCCAGCGGAT
GCCAATAGCG AAGAGGTGAC GCAAATTCTG CTGACGGCGG CGCAGCGCTG TTCTTTGGTG
CTGGACAACC CGCCGCCTGA AATCTTTCTG GTGGATCTCC AGCAGGGTAT TCAAATTTTC
GAACTGCGTA TCTATGCCGC GGAAATGGGA CACCGTATGC CATTACGCCA TGAGATCCAC
CAATTGATTC TGGCGGGCTT CCGCGAGCAC GGTATTGATA TGCCGTTCCC GCCGTTCCAG
ATGCGTCTGG AGAGTCTCGG CGGTAAACAA ACGGGGAGAA CGTTAACGTC AGCGGGTAAA
ACCAGCCGCC CGGCGGGCAG TTTGTAG
 
Protein sequence
MRLIIAFLMA WCLSTGAFAA TAPDAKQITQ ELEQAKAAKP AQPEAVEALQ TALNALEERK 
GSLERAKQYQ HVIDNFPKLS ATLRAQLNNL RDEPRSVPPE MSTEALNQEI LQVSSQLLDK
TREAQQEQER VREIADSLSQ LPQQQNDARR QLNEIERRLG AAGGSAALSQ AQSLSMQAES
AKLKALVDEL ELAQLSANNR QELARLRSEL AEKQSQQLDA YLQALRNQLN SLRQREAERA
LESTELLAEN SAGLPEGIVE QFKVNRELSQ ALNQQAQRMD LVASQQRQAT SQTLQVRQAL
NTLREQSQWL GVSNMLGEAL RAQVARLPEM PKPQQLDTEM AQLRVHRMRY EELLNKQPQL
RQIRQANGQP LTAEQNQILD AQLRTQRELL NSLLQGGDTL ILELTKLKVS NSQLEDALKE
VNEATHRYLF WTADVSPLSL SWPVDLVQDL RRLISLDTFN QLGKASIMML TSKETLLPLF
GALALVGFSL YSRQHFNRFL ERSASRVGKV TQDHFSLTLR TVFWSILVAS PLPVLWATLG
YGLQEAWPYP LAVAIGDGVT ATVPLLWVVM ICAAFARPNG LFVAHFGWPR NRVAKAMRYY
LMSIGLIVPL IMAVIMFDNL NDREFSGSLG RLCFILICGA LALVTLSLKK AGIPLYLDKE
GNGDNMVNSL LWNMLMGAPL IAILAAAVGY LATAQALLAR LETSVAIWFL LLVIYHVIRR
WMLIQRRRLA FDRAKHRRAE MLAQRARGEE EPAHSSSLEG AVDIDESEID LDAISAQSLR
LVRSILMLIA LLSVIVLWSE IHSAFGFLEN ISLWDVTSTV QGVESLEPIT LGAVLIAILV
FIITTQLVRN LPALLELALL QHLDLTPGTG YAITTITKYL LMLIGGLVGF SMIGIEWSKL
QWLVAALGVG LGFGLQEIFA NFISGLIILF EKPIRIGDTV TIRDLTGSVT KINTRATTIS
DWDRKEIIVP NKAFITEQFI NWSLSDSVTR VVLTIPAPAD ANSEEVTQIL LTAAQRCSLV
LDNPPPEIFL VDLQQGIQIF ELRIYAAEMG HRMPLRHEIH QLILAGFREH GIDMPFPPFQ
MRLESLGGKQ TGRTLTSAGK TSRPAGSL