| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A4600 |
|---|
| Symbol | groEL |
|---|
| ID | 6518605 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | + |
|---|
| Start bp | 4474999 |
|---|
| End bp | 4476645 |
|---|
| Gene Length | 1647 bp |
|---|
| Protein Length | 548 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642749541 |
|---|
| Product | chaperonin GroEL |
|---|
| Protein accession | YP_002117276 |
|---|
| Protein GI | 194735124 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
|---|
| TIGRFAM ID | [TIGR02348] chaperonin GroL |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCTA AAGACGTAAA ATTCGGTAAC GACGCTCGTG TGAAAATGCT GCGCGGCGTA
AACGTACTGG CAGATGCAGT GAAAGTAACC CTCGGTCCGA AAGGCCGTAA CGTGGTTCTG
GATAAATCTT TCGGTGCGCC GACTATCACT AAAGATGGTG TTTCCGTAGC GCGTGAAATC
GAGCTGGAAG ACAAGTTTGA AAACATGGGC GCGCAGATGG TGAAAGAAGT TGCCTCTAAA
GCGAACGACG CTGCAGGCGA CGGCACCACC ACCGCGACCG TACTGGCGCA GTCCATCATT
ACCGAAGGCC TGAAAGCCGT TGCTGCGGGC ATGAACCCGA TGGACCTGAA ACGTGGTATC
GACAAAGCGG TTGCTGCTGC GGTTGAAGAG CTGAAAGCCC TGTCCGTACC GTGCTCCGAC
TCTAAAGCGA TTGCTCAGGT AGGTACTATC TCCGCTAACT CCGACGAAAC CGTAGGTAAA
CTGATCGCGG AAGCGATGGA TAAAGTCGGT AAAGAAGGCG TCATCACCGT TGAAGACGGT
ACCGGTCTGC AGGACGAACT GGACGTGGTT GAAGGTATGC AGTTTGACCG CGGCTACCTG
TCTCCTTACT TCATCAACAA GCCGGAAACT GGCGCAGTAG AGCTGGAAAG CCCGTTCATC
CTGCTGGCTG ATAAGAAAAT CTCCAACATC CGCGAAATGC TGCCGGTTCT GGAAGCCGTT
GCAAAAGCAG GCAAACCGCT GCTGATCATC GCTGAAGATG TTGAAGGCGA AGCGCTGGCT
ACCCTGGTTG TTAACACCAT GCGTGGCATC GTGAAAGTGG CTGCGGTTAA GGCACCTGGC
TTCGGCGATC GTCGTAAAGC AATGCTGCAG GATATCGCTA CCCTGACCGG CGGTACCGTA
ATCTCTGAAG AGATCGGTAT GGAGCTGGAA AAAGCAACCC TGGAAGACCT GGGTCAGGCG
AAACGCGTTG TGATCAACAA AGACACCACC ACCATCATCG ATGGCGTGGG TGAAGAAGCT
GCAATCCAGG GCCGTGTTGC TCAGATCCGT CAGCAGATTG AAGAAGCGAC CTCCGACTAC
GATCGTGAAA AACTGCAGGA GCGCGTAGCG AAACTGGCAG GCGGCGTTGC GGTTATCAAA
GTTGGCGCTG CGACCGAAGT TGAAATGAAA GAGAAGAAAG CCCGCGTTGA AGATGCCCTG
CACGCGACCC GTGCTGCGGT AGAAGAAGGC GTGGTTGCTG GTGGTGGCGT TGCGCTGATC
CGCGTTGCTT CTAAAATTGC TGACCTGAAA GGCCAGAACG AAGACCAGAA CGTGGGTATC
AAAGTTGCGC TGCGCGCAAT GGAAGCTCCG CTGCGTCAGA TCGTGCTGAA CTGCGGCGAA
GAGCCGTCTG TTGTCGCTAA CACCGTTAAA GGCGGCGACG GTAACTACGG TTACAACGCA
GCAACTGAAG AATACGGCAA CATGATCGAT ATGGGTATCC TGGACCCAAC CAAAGTTACC
CGTTCTGCGC TGCAGTACGC GGCTTCAGTG GCTGGTCTGA TGATCACTAC CGAGTGCATG
GTGACCGACC TGCCGAAAAG CGATGCTCCT GATTTAGGCG CTGCTGGCGG CATGGGTGGT
ATGGGTGGTA TGGGCGGCAT GATGTAA
|
|---|
| Protein sequence | MAAKDVKFGN DARVKMLRGV NVLADAVKVT LGPKGRNVVL DKSFGAPTIT KDGVSVAREI
ELEDKFENMG AQMVKEVASK ANDAAGDGTT TATVLAQSII TEGLKAVAAG MNPMDLKRGI
DKAVAAAVEE LKALSVPCSD SKAIAQVGTI SANSDETVGK LIAEAMDKVG KEGVITVEDG
TGLQDELDVV EGMQFDRGYL SPYFINKPET GAVELESPFI LLADKKISNI REMLPVLEAV
AKAGKPLLII AEDVEGEALA TLVVNTMRGI VKVAAVKAPG FGDRRKAMLQ DIATLTGGTV
ISEEIGMELE KATLEDLGQA KRVVINKDTT TIIDGVGEEA AIQGRVAQIR QQIEEATSDY
DREKLQERVA KLAGGVAVIK VGAATEVEMK EKKARVEDAL HATRAAVEEG VVAGGGVALI
RVASKIADLK GQNEDQNVGI KVALRAMEAP LRQIVLNCGE EPSVVANTVK GGDGNYGYNA
ATEEYGNMID MGILDPTKVT RSALQYAASV AGLMITTECM VTDLPKSDAP DLGAAGGMGG
MGGMGGMM
|
|---|
| |