Gene SeSA_A4558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4558 
Symbol 
ID6518877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp4439756 
End bp4440475 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content50% 
IMG OID642749502 
ProductDNA-binding transcriptional activator DcuR 
Protein accessionYP_002117238 
Protein GI194737202 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG4565] Response regulator of citrate/malate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAATG TATTAATTGT CGATGACGAT GCGATGGTCG CGGAGTTAAA TCGCCGCTAT 
GTCGCGCAAA TCTCCGGTTT TCATTGTTGT GGAACCGCTT CGACGCTGGA AAAAGCGAAA
GAGTTTATCT TCAACAGTGA AAATCACATT GACCTAATCC TGCTGGATAT CTACATGCAG
CAGGAAAACG GATTGGATCT GCTGCCTGCC CTGCACAGCG CAGGCTGCAA AAGCGACGTT
ATTGTCATTT CTTCTGCCGC TGACGCCGCC ACCATTAAAG ATTCGCTTCA CTACGGCGTG
GTGGATTATC TGATCAAGCC TTTTCAGGCC ACGCGCTTTG AAGAAGCGCT GACCGGCTGG
CTACGTAAGA AAACGGCGAT GGAAAAACGC CAGTATTACG AACAGTCTGA GCTTGACCTG
CTCATTCACG GTAATTCATC CAGCGAGCAG GAGCCTCGTC GGCTACCAAA AGGGCTGACG
CAGCAAACGC TACGCACCTT ATGCCAGTGG ATTGATGCGC ATCAGGAGCA GGAATTTTCT
ACCGACGAGT TGGCCAACGA AGTGAATATC TCGCGCGTCT CCTGCCGTAA ATATCTCATC
TGGCTGGTGA ATTGCCATAT CTTGTTTACC AGTATTCATT ACGGCGTGAC CGGCAGGCCG
GTTTACCGCT ACCGCGTTCA GCCGGAACAT TACTCTTTAC TGAAACAATA TTGTCAGTAA
 
Protein sequence
MINVLIVDDD AMVAELNRRY VAQISGFHCC GTASTLEKAK EFIFNSENHI DLILLDIYMQ 
QENGLDLLPA LHSAGCKSDV IVISSAADAA TIKDSLHYGV VDYLIKPFQA TRFEEALTGW
LRKKTAMEKR QYYEQSELDL LIHGNSSSEQ EPRRLPKGLT QQTLRTLCQW IDAHQEQEFS
TDELANEVNI SRVSCRKYLI WLVNCHILFT SIHYGVTGRP VYRYRVQPEH YSLLKQYCQ