Gene SeSA_A4555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4555 
Symbol 
ID6515257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp4435944 
End bp4437590 
Gene Length1647 bp 
Protein Length548 aa 
Translation table11 
GC content55% 
IMG OID642749499 
Productfumarate hydratase class I, anaerobic 
Protein accessionYP_002117235 
Protein GI194734207 
COG category[C] Energy production and conversion 
COG ID[COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain 
TIGRFAM ID[TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAAA AAGAGTTTAT CTATCAGGCG CCTTTCCCGA TGGGAGAGGA CAAAACAGAG 
TATTATCTGC TCACCTCCGA TTATGTCAGC GTCAGTGAAT TCAATGGAGA ATCTATCCTA 
AACGTTGAGC CGCAGGCGTT AACGTTGCTG GCTCAGCAGG CCTTCCATGA TGCGTCTTTT 
ATGCTCCGTC CTGAACACCA GCAGCAAGTC GCCGCCATTC TCCATGACCC CGAAGCCAGC 
GAAAACGACA AATATGTGGC ATTGCAATTC CTGAGAAACT CCGAAATCGC CGCCAAAGGC 
ATTCTACCGA CCTGCCAGGA TACCGGCACG GCGATTATCA TGGGTAAAAA AGGCCAACGC 
GTCTGGACGG GCGGCGGCGA TGAAGCCGCG CTCTCCAAAG GCGTGTTTAA TACCTATATC 
GAAGATAACC TGCGCTACTC GCAGAACGCA CCGCTGGATA TGTACAAAGA GGTCAATACC 
GGCAGCAACC TGCCAGCGCA AATCGATCTC TATGCCGTCG ACGGCGACGA GTACAAGTTC 
CTTTGCGTGG CGAAAGGCGG CGGTTCAGCA AACAAAACGT ATCTCTATCA GGAGACCAAA 
GCGCTGCTCA CCCCAGGCAA GCTGAAAAAC TTCCTCGTTG AGAAAATGCG CACGCTGGGC 
ACCGCAGCCT GTCCGCCATA CCATATCGCC TTTGTCATTG GCGGCACCTC GGCGGAAAGC 
ACGCTGAAAA CCGTTAAACT CGCCAGCACC CACTATTACG ACGCGCTGCC GACGGAAGGT 
AACGAGCACG GCCAGGCATT CCGCGATCTC CACCTGGAAC AGGAACTGCT GGAAGAAGCG 
CATAAACTTG GCCTCGGCGC CCAGTTCGGC GGGAAATATT TCGCCCACGA TATTCGCGTA 
ATTCGCCTGC CTCGTCACGG CGCTTCCTGT CCGGTGGGGA TGGGCGTCTC CTGCTCGGCA 
GACCGTAACA TCAAAGCGAA AATCAACCGC GAAGGCATCT GGATCGAAAA ACTGGAACAC 
AATCCGGGCC AGTATATTCC GCCAGCGCTG CGTCAGGCGG GCGAAGGCGA CGCGGTGAAA 
GTCGATCTCA ACCGTCCGAT GAAAGAGATC CTCGCCCAGC TATCGCAGTA CCCGGTCTCG 
ACTCGCCTGT CGCTGACGGG CACCATTATC GTAGGTCGCG ATATCGCCCA CGCGAAGCTA 
AAAGAGCGTA TTGAATCCGG CGAAGACCTG CCGCAGTATA TTAAAGACCA CCCCATCTAT 
TACGCAGGCC CGGCAAAAAC CCCGGCAGGT TATCCATCTG GCTCATTAGG CCCCACCACC 
GCAGGCCGAA TGGACTCTTA TGTCGATCTG CTGCAATCCC ACGGCGGCAG TATGATCATG 
CTGGCGAAAG GCAACCGTAG TCAGCAGGTC ACGGATGCCT GTAAAAAACA CGGCGGCTTT 
TATTTGGGCA GTATCGGCGG CCCGGCGGCG GTACTGGCAC AGCAGAGCAT TAAGCATCTG 
GAGTGCGTCG AGTATCCGGA ACTCGGCATG GAAGCTATCT GGAAAATTGA AGTAGAAGAT 
TTCCCGGCCT TTATCCTGGT GGATGACAAA GGCAACGATT TCTTCCAGCA GATTGTCAGC 
AAACAGTGCG CTAACTGCGC GAAATAA
 
Protein sequence
MSKKEFIYQA PFPMGEDKTE YYLLTSDYVS VSEFNGESIL NVEPQALTLL AQQAFHDASF 
MLRPEHQQQV AAILHDPEAS ENDKYVALQF LRNSEIAAKG ILPTCQDTGT AIIMGKKGQR 
VWTGGGDEAA LSKGVFNTYI EDNLRYSQNA PLDMYKEVNT GSNLPAQIDL YAVDGDEYKF 
LCVAKGGGSA NKTYLYQETK ALLTPGKLKN FLVEKMRTLG TAACPPYHIA FVIGGTSAES 
TLKTVKLAST HYYDALPTEG NEHGQAFRDL HLEQELLEEA HKLGLGAQFG GKYFAHDIRV 
IRLPRHGASC PVGMGVSCSA DRNIKAKINR EGIWIEKLEH NPGQYIPPAL RQAGEGDAVK 
VDLNRPMKEI LAQLSQYPVS TRLSLTGTII VGRDIAHAKL KERIESGEDL PQYIKDHPIY 
YAGPAKTPAG YPSGSLGPTT AGRMDSYVDL LQSHGGSMIM LAKGNRSQQV TDACKKHGGF 
YLGSIGGPAA VLAQQSIKHL ECVEYPELGM EAIWKIEVED FPAFILVDDK GNDFFQQIVS 
KQCANCAK