Gene SeSA_A4465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4465 
Symbol 
ID6515728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp4336135 
End bp4337352 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content51% 
IMG OID642749416 
Productphage major capsid protein, HK97 family 
Protein accessionYP_002117152 
Protein GI194735635 
COG category 
COG ID 
TIGRFAM ID[TIGR01554] phage major capsid protein, HK97 family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000706363 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTGAAG TAAATGAAAT TCTGAAAAAA GTTACCGCCA GCATTGAAGA GGCGACGGAT 
AAGTTTAATG CCAGGGCTGA AGATGCACTT AAAGAAGCGA AGAAGTCCGG CAAACTGTCA
GAAGAAACAA AGGCAGCCGT TGACAAGATG GCGTCTGAAT TTAACGCCCT GCGTGAAGCT
GAAAAAACGC TGAAGGCGGC AATAGGGGAA CTTGAGCAGC ATGTTGCGCA GATGCCGCTG
GCCAATGCAA AACATATTGT TGAGACGGTT GGCCAACAGG TCATTTCTGC GGAAGCTCTT
AAAACATTCT CCGCCAGCGT GGAAGGAGGG AAACGCGTCA ACATCCCGGT AAACGCTGCA
CTTATCTCCT CCGGTGTCGC TGAAGGCGTG GTAGAGCCTC AGCGCCTGCC GGGTATTGAT
ACTACCCCCA AACAACGCCT GTTTATACGT GATCTGATTG CACCTGGTCG CACATCATCT
CCGGCAATCT TCTGGGTTCA GCAGACGGGT TTTACCAACA AAGCCGCCGT GGTTGCGGAG
AACACAACCA AGCCGTACAG CGATATTGCG TTCACCACGA AGATCACCCC GGTAACTACC
ATTGCGCATA TGTTCAAGGC GTCCAAACAG ATTCTGGATG ACTTCGCACA GTTACAGTCC
ACCGTTGATG CCGAAATGCG CTACGGCCTG AAATATGTTG AAGAGCAGGA AATCCTTTTT
GGTGACGGTA CCGGCGTTCA TCTGCACGGT ATCGTTCCGC AGGCTTCGGC CTTCAGTGCA
GAATTTAAGG TTGAACAGCA AAACGGCATT GATGACCTGC GCCTGGCAAT GCTGCAGGCG
CAACTGGCGC GCTTCCCGGC GTCAGGGCAT GTTCTGCACT TTATCGACTG GGCAAAAATC
GAACTCACTA AAGACACGCT TGGGCGTTAT ATCCTTGCCA ATCCATCAGG TCTGACTGGC
CCGACATTGT GGGGGCTTCC GGTGGTGGCG ACCGAAGCTG CGGCATTTAA GGGCAAGTTC
CTGACAGGCG CATTTAACGC TGGTGCGCAG ATTTTTGATC GTGAGGATGC CAATGTGGTT
ATTTCCACTG AAAACGCCGA CGATTTTGAG AAAAACATGA TCTCAATTCG TTGTGAAGAG
CGTCTGGCAC TGGCAGTCAA ACGTCCGGAA GCATTCATCT ATGGTTCCTT CACTGTCCCG
GCACCTGCTG GCGCATAA
 
Protein sequence
MSEVNEILKK VTASIEEATD KFNARAEDAL KEAKKSGKLS EETKAAVDKM ASEFNALREA 
EKTLKAAIGE LEQHVAQMPL ANAKHIVETV GQQVISAEAL KTFSASVEGG KRVNIPVNAA
LISSGVAEGV VEPQRLPGID TTPKQRLFIR DLIAPGRTSS PAIFWVQQTG FTNKAAVVAE
NTTKPYSDIA FTTKITPVTT IAHMFKASKQ ILDDFAQLQS TVDAEMRYGL KYVEEQEILF
GDGTGVHLHG IVPQASAFSA EFKVEQQNGI DDLRLAMLQA QLARFPASGH VLHFIDWAKI
ELTKDTLGRY ILANPSGLTG PTLWGLPVVA TEAAAFKGKF LTGAFNAGAQ IFDREDANVV
ISTENADDFE KNMISIRCEE RLALAVKRPE AFIYGSFTVP APAGA