Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A4430 |
Symbol | |
ID | 6519771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 4310543 |
End bp | 4311868 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642749381 |
Product | DNA-damage-inducible SOS response protein |
Protein accession | YP_002117117 |
Protein GI | 194736298 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000000533043 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGCTTT TTACCTCCTC TGATAAAGCT CTCTGGCGTC TCGCGCTGCC GATGATTTTT TCTAACATCA CCGTCCCCTT ACTGGGGCTG GTTGATACGG CGGTGATTGG TCATCTGGAC AGCCCGGTTT TCCTGGGCGG CGTGGCGGTG GGCGCGACTG CCACCAGCTT TCTTTTCATG CTGCTGCTAT TTCTACGTAT GAGCACCACC GGACTAACGG CGCAGGCATT TGGCGCCAAA AATCCGCAGG CGTTAGCCCG GGCGCTCATT CAACCGTTAT TGCTGGCACT GGGCGCTGGC GTGATGATTG TGCTATTTCG CACGCCGCTT ATCGAGCTGG CTTTACATAT TGTCGGCGGG AACGACGCTG TCCTGGTGCA GGCGAGACGC TTCCTTGAAA TTCGTTGGCT AAGCGCTCCC GCGTCACTGG CGAATCTGGT GCTGCTCGGG TGGCTGTTAG GCGTTCAGTA TGCGCGGGCG CCGGTTATCT TGTTGGTCGT GGGCAATATC CTCAACATCG CGCTCGACCT GTGGCTGGTG ATGGGACTTC ATATGAACGT GCAGGGCGCC GCCCTGGCGA CGGTCATCGC AGAATATGCC ACATTACTGA TCGGCTTTAT GATGGTACGT AAAGTTCTCC ATCTCCGCGG TGTGTCGCTG GATATGCTAA AACAGGCCTG GCGCGGCAAC GTGCGCCGCC TTTTAGCGCT CAATCGCGAT ATCATGCTGC GCTCATTGCT CCTTCAGCTT TGTTTTGGCG CAATCACGGT GTCAGGCGCG CGGCTGGGCA GCGATATTAT CGCGGTAAAT GCAGTCCTGA TGACCTTACT CACCTTTACG GCCTATGCGC TGGACGGTTT TGCTTATGCG GTGGAGGCGC ACTCCGGTCA GGCTTACGGC GCGCGTGACG GTAGCAAGCT ACTGGACGTC TGGCGAGCGG CGTGTCGTCA GTCAGGAATT GTGGCCTTGT TGTTTTCCAC AGTCTATGCC CTGGCAGGCG AACATATTGT CGCGTTACTG ACCTCATTGC CGCAAATACA GCTACTGGCG GATCGGTATC TTATCTGGCA GGTGGTATTA CCGCTGGTGG GCGTATGGTG CTATCTGCTC GACGGTATGT TTATTGGCGC GACGCGCGCT GCCGAAATGC GCAATAGCAT GGCTGTCGCC GCGGGAGGAT TCGCGCTGAC GCTCTTCGCT CTGCCGGTAT TAGGAAATCA TGGTTTATGG CTGGCATTAA CCGTGTTCCT GGCGCTTCGC GGTCTGTCGT TGAGCCTTAT CTGGCGTCGT CACTGGCGCG AGGGTACATG GTTTGCCAGA TCGTGA
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Protein sequence | MPLFTSSDKA LWRLALPMIF SNITVPLLGL VDTAVIGHLD SPVFLGGVAV GATATSFLFM LLLFLRMSTT GLTAQAFGAK NPQALARALI QPLLLALGAG VMIVLFRTPL IELALHIVGG NDAVLVQARR FLEIRWLSAP ASLANLVLLG WLLGVQYARA PVILLVVGNI LNIALDLWLV MGLHMNVQGA ALATVIAEYA TLLIGFMMVR KVLHLRGVSL DMLKQAWRGN VRRLLALNRD IMLRSLLLQL CFGAITVSGA RLGSDIIAVN AVLMTLLTFT AYALDGFAYA VEAHSGQAYG ARDGSKLLDV WRAACRQSGI VALLFSTVYA LAGEHIVALL TSLPQIQLLA DRYLIWQVVL PLVGVWCYLL DGMFIGATRA AEMRNSMAVA AGGFALTLFA LPVLGNHGLW LALTVFLALR GLSLSLIWRR HWREGTWFAR S
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