Gene SeSA_A4418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4418 
SymbolxylE 
ID6519797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp4295461 
End bp4296936 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content51% 
IMG OID642749369 
ProductD-xylose transporter XylE 
Protein accessionYP_002117105 
Protein GI194736273 
COG category 
COG ID 
TIGRFAM ID[TIGR00879] MFS transporter, sugar porter (SP) family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones8 
Fosmid unclonability p-value0.00317086 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACACCC ACTATAATTC CCGCTATATT TTTTCCATTA CCTTAGTCGC AACATTAGGA 
GGGTTATTAT TCGGCTATGA CACTGCCGTC ATATCCGGAA CGGTAGAATC CTTAAATACC 
GTGTTTGTCG CTCCGCAACA TTTAAGTGAA TCCGCCGCCA ACTCGCTATT GGGCTTCTGC 
GTCGCCAGTG CGTTGATTGG CTGCATCATC GGCGGTGCGC TGGGCGGTTA TTGCAGTAAC 
CGCTTTGGTC GTCGGGACTC GCTGAAAATC GCCGCTCTGC TGTTCTTTAT TTCCGGTATT 
GGCTCCGCAT GGCCAGAATT AGGATTTACC ACGATTAACC CAGATAATGC CGTACCTGTT 
TATTTGGCCG GATATGTCCC CGAATTTGTT ATTTATCGCA TCATTGGTGG TATTGGCGTT 
GGTTTAGCCT CAATGCTCTC ACCGATGTAT ATTGCTGAAC TGGCTCCAGC GCATATTCGT 
GGGAAACTGG TTTCCTTTAA CCAGTTCGCC ATTATTTTTG GTCAACTGTT GGTGTATTGC 
GTTAACTATT TCATTGCCCG CTCTGGTGAC GCTAACTGGC TGAATACCGA TGGCTGGCGA 
TATATGTTTG CTTCCGAAAG TATTCCCGCC CTGCTGTTTT TACTGCTGCT GTATACCGTA 
CCGGAAAGCC CGCGCTGGCT GATGGCACGT GGCAAACACG AACAGGCGGA GGGCATTCTG 
CGCAAAATTA TGGGTAGCAG CCTCACTACC CAGGCCATGC AGGAGATCAA CCAGTCTCTG 
GAGCATGGTC GTAAAACCGG CGGACGCCTG TTGATGTTTG GCGTGGGCGT GATAGTCATT 
GGCGTGATGC TGTCCGTCTT CCAGCAGTTT GTCGGCATTA ACGTCGTGCT CTACTACGCG 
CCGGAAGTGT TTAAAACGTT AGGGGCCAGC ACCGACGTGG CGCTCTTGCA GACCATTATT 
GTCGGCGTAA TCAACCTGAG CTTCACCGTG CTGGCCATCA TGACGGTAGA TAAATTTGGT 
CGCAAACCGC TGCAAATTAT TGGCGCATTG GGTATGGCTC TTGGGATGTT CAGCCTTGGC 
ACCGCGTTTT ACACCCAGGC TTCCGGGCTG ATAGCGCTGC TGTCGATGCT GTTTTACGTC 
GCCGCATTTG CCATGTCCTG GGGACCGGTT TGTTGGGTGC TGCTGGCAGA AATCTTCCCG 
AACGCGATTC GTGGCAAAGC GCTCGCCATT GCCGTCGCCG CGCAGTGGCT GGCGAACTAC 
TTCGTCTCCT GGACCTTCCC GATGATGGAC AAAAATTCGT GGCTGGTTTC CCATTTCCAC 
AACGGTTTCT CCTACTGGAT TTACGGTTGT ATGGGTATTC TGGCGGCGCT GTTTATGTGG 
AAGTTCGTGC CGGAAACCAA AGGCAAAACG CTGGAAGAAC TTGAGAAGTT ATGGACGCCA 
GCAGAAGAGA AAACGCCGAA AGCCGCCATA CAATAA
 
Protein sequence
MNTHYNSRYI FSITLVATLG GLLFGYDTAV ISGTVESLNT VFVAPQHLSE SAANSLLGFC 
VASALIGCII GGALGGYCSN RFGRRDSLKI AALLFFISGI GSAWPELGFT TINPDNAVPV 
YLAGYVPEFV IYRIIGGIGV GLASMLSPMY IAELAPAHIR GKLVSFNQFA IIFGQLLVYC 
VNYFIARSGD ANWLNTDGWR YMFASESIPA LLFLLLLYTV PESPRWLMAR GKHEQAEGIL 
RKIMGSSLTT QAMQEINQSL EHGRKTGGRL LMFGVGVIVI GVMLSVFQQF VGINVVLYYA 
PEVFKTLGAS TDVALLQTII VGVINLSFTV LAIMTVDKFG RKPLQIIGAL GMALGMFSLG 
TAFYTQASGL IALLSMLFYV AAFAMSWGPV CWVLLAEIFP NAIRGKALAI AVAAQWLANY 
FVSWTFPMMD KNSWLVSHFH NGFSYWIYGC MGILAALFMW KFVPETKGKT LEELEKLWTP 
AEEKTPKAAI Q