| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A4401 |
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| Symbol | metH |
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| ID | 6519778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | + |
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| Start bp | 4274314 |
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| End bp | 4277997 |
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| Gene Length | 3684 bp |
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| Protein Length | 1227 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642749352 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_002117088 |
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| Protein GI | 194737162 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.90979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.334358 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCAGCA AAGTTGAACA ACTGCGTGCG CAGTTAAATG AACGTATTCT GGTGCTGGAC
GGCGGTATGG GCACCATGAT CCAGAGCTAT CGTCTACATG AAGAAGATTT CCGCGGGGAG
CGCTTTGCCG ACTGGCCCTG CGACCTGAAA GGCAACAATG ACCTGCTGGT ACTCAGCAAG
CCGGAGGTGA TCGCCGCTAT CCACAACGCC TACTTTGAGG CTGGCGCGGA TATCATCGAA
ACCAACACCT TTAACTCGAC AACCATTGCG ATGGCGGATT ACCGGATGGA ATCCCTGTCG
GCGGAAATTA ACTATGCGGC GGCCAAACTG GCGCGCGCCT GCGCCGATGA ATGGACGGCG
CGAACACCAG AAAAACCACG CTTTGTTGCG GGCGTGCTTG GTCCAACTAA CCGCACGGCC
TCCATTTCGC CGGACGTCAA CGACCCGGCG TTTCGTAATA TCACCTTCGA TCAGCTGGTG
GCGGCCTACC GTGAATCCAC CAAAGCGCTG GTGGAAGGTG GCGTAGATCT GATTCTGATT
GAGACCGTCT TTGACACCCT GAATGCGAAA GCGGCGGTGT TTGCGGTGAA AGAAGAGTTT
GAAGCGCTGG GCGTTGATCT GCCGATCATG ATTTCCGGCA CCATCACCGA CGCCTCTGGT
CGCACCCTCT CCGGCCAGAC TACCGAAGCC TTTTATAACT CGCTGCGCCA CGCCGAGGCG
CTCACTTTTG GCCTTAACTG CGCGCTGGGG CCAGATGAAC TGCGCCAGTA CGTCCAGGAA
CTGTCGCGGA TTGCCGAATG CTACGTCACC GCGCACCCGA ACGCCGGCCT GCCGAACGCT
TTCGGCGAGT ACGACCTCGA CGCCGACACC ATGGCGAAAC AGATTCGCGA ATGGGCGGAG
GCGGGCTTCC TGAATATCGT TGGCGGCTGC TGCGGCACCA CGCCGGAGCA TATTGCGGCG
ATGAGCCGCG CCGTTGCCGG TTTGCCGCCG CGCCAGCTGC CGGATATCCC GGTTGCCTGC
CGCCTTTCCG GCCTGGAGCC GCTGAACATT GGCGACGACA GCCTGTTTGT CAACGTCGGC
GAACGTACTA ACGTCACCGG CTCGGCCAAA TTTAAACGGC TGATCAAAGA AGAGAAATAC
AGCGAAGCGC TGGATGTCGC CCGTCAGCAG GTCGAAAGCG GCGCGCAGAT TATTGATATC
AACATGGATG AGGGGATGCT CGACGCCGAA GCGGCGATGG TGCGTTTCCT CAGCCTGATT
GCCGGTGAGC CGGATATTGC CCGTGTACCA ATCATGATCG ACTCCTCCAA ATGGGAGGTT
ATCGAAAAAG GGCTGAAGTG CATTCAGGGT AAAGGCATCG TCAACTCTAT TTCGATGAAA
GAGGGCGTGG AAGCTTTTAT TCATCATGCG AAGTTGCTAC GTCGCTACGG CGCGGCAGTG
GTGGTGATGG CCTTTGATGA GCAGGGGCAG GCCGATACCC GCGAGCGTAA AATCGAGATT
TGCCGCCGGG CGTACAAAAT TCTCACCGAA GAGGTGGGCT TCCCGCCGGA AGACATCATC
TTCGACCCGA ATATCTTCGC CGTGGCGACC GGTATTGAAG AGCACAACAA CTATGCGCAG
GACTTTATCG GCGCTTGCGA AGATATTAAA CGCGAGCTGC CGCATGCGCT GATCTCCGGC
GGCGTGTCTA ACGTGTCCTT CTCGTTCCGC GGCAACGACC CGGTACGTGA GGCTATCCAC
GCGGTATTCC TCTACTACGC CATCCGCAAC GGCATGGACA TGGGCATCGT CAACGCCGGG
CAATTGGCGA TTTATGACGA CCTGCCTGCC GAACTGCGCG ATGCGGTTGA AGATGTCATT
CTTAACCGTC GCGATGACGG CACTGAGCGT TTGCTGGATT TGGCGGAGAA ATACCGCGGC
AGCAAAACCG ACGAAGCTGC CAACGCCCAG CAGGCGGAAT GGCGTAGCTG GGACGTGAAA
AAGCGTCTCG AATACTCGCT GGTGAAAGGC ATTACCGAAT TTATCGAACA GGATACCGAA
GAAGCCCGCC AGCAGGCCTC CCGCCCGATT GAGGTGATCG AAGGGCCGCT GATGGACGGC
ATGAACGTGG TCGGCGACCT GTTCGGCGAA GGGAAAATGT TCCTGCCGCA GGTGGTGAAA
TCCGCTCGCG TGATGAAACA AGCGGTGGCT TACCTGGAGC CGTTTATTGA AGCCAGCAAA
GAAAAAGGCT CCAGCAACGG CAAGATGGTC ATCGCCACCG TGAAGGGCGA TGTGCACGAC
ATTGGCAAGA ACATTGTTGG CGTGGTGCTG CAATGCAACA ACTACGAAAT CGTCGATCTT
GGCGTGATGG TGCCAGCGGA GAAAATCCTC AGAACGGCGC GTGAAGTGAA TGCCGATCTG
ATCGGTCTTT CCGGGCTTAT CACCCCGTCG CTGGACGAGA TGGTCAACGT GGCGAAAGAG
ATGGAGCGTC AGGGCTTTAC TATCCCGCTA CTGATCGGCG GCGCAACCAC TTCGAAAGCG
CACACCGCGG TGAAAATCGA GCAGAACTAC AGCGGTCCGA CGGTCTACGT GCAGAATGCT
TCGCGTACCG TGGGCGTGGT GGCGGCGCTA CTCTCCGACA CCCAGCGCGA TGACTTTGTC
GCCCGTACCC GCAAAGAGTA CGAAACCGTG CGTATTCAGC ACGCCCGCAA AAAACCGCGC
ACGCCGCCGG TCACGCTGGA AGCGGCGCGC GATAACGATC TGGCATTCGA TTGGGAACGC
TACACCCCGC CAGTAGCCCA CCGTCTGGGC GTGCAGGAGG TAGAAGCCAG CATCGAAACG
CTGCGCAACT ACATCGACTG GACGCCGTTC TTTATGACCT GGTCGCTGGC CGGCAAATAC
CCGCGTATTC TGGAAGATGA AGTGGTGGGC GTTGAGGCGC AGCGCCTGTT TAAAGACGCC
AACGACATGC TGGATAAACT GAGCGCGGAG AAACTGTTGA ATCCGCGTGG CGTGGTGGGC
TTGTTCCCGG CGAACCGTGT GGGTGACGAC ATCGAAATCT ATCGCGACGA AACCCGTACT
CATGTTCTGA CGGTCAGCCA CCACCTGCGC CAGCAGACTG AGAAAGTCGG TTTTGCCAAC
TACTGTCTGG CGGATTTTGT CGCGCCGAAA TTGTCCGGAA AAGCGGACTA CATCGGCGCG
TTTGCCGTCA CCGGCGGTCT TGAAGAAGAC GCCCTGGCTG ATGCTTACGA AGCGCAACAC
GACGACTATA ACAAGATCAT GGTGAAAGCG ATTGCCGACC GTCTGGCGGA AGCGTTTGCC
GAGTACCTGC ATGAGCGTGT ACGTAAGGTT TACTGGGGAT ATGCGCCGAA CGAGAGCCTG
AGTAACGACG AATTAATCCG CGAAAACTAC CAGGGGATTC GCCCGGCGCC GGGTTATCCT
GCCTGCCCGG AACATACCGA AAAAGGCACT ATCTGGCAGC TACTGGATGT CGAAAAACAC
ACCGGGATGA AGCTCACCGA ATCTTTCGCC ATGTGGCCTG GCGCGTCGGT CTCCGGCTGG
TACTTCAGCC ATCCTGAGAG CAAATACTTC GCGGTAGCGC AGATTCAACG CGATCAGGTG
ACAGATTATG CTTTCCGTAA AGGAATGAGC GTTGAGAACG TTGAGCGGTG GCTGGCGCCG
AACCTGGGTT ACGATGCGGA CTGA
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| Protein sequence | MSSKVEQLRA QLNERILVLD GGMGTMIQSY RLHEEDFRGE RFADWPCDLK GNNDLLVLSK
PEVIAAIHNA YFEAGADIIE TNTFNSTTIA MADYRMESLS AEINYAAAKL ARACADEWTA
RTPEKPRFVA GVLGPTNRTA SISPDVNDPA FRNITFDQLV AAYRESTKAL VEGGVDLILI
ETVFDTLNAK AAVFAVKEEF EALGVDLPIM ISGTITDASG RTLSGQTTEA FYNSLRHAEA
LTFGLNCALG PDELRQYVQE LSRIAECYVT AHPNAGLPNA FGEYDLDADT MAKQIREWAE
AGFLNIVGGC CGTTPEHIAA MSRAVAGLPP RQLPDIPVAC RLSGLEPLNI GDDSLFVNVG
ERTNVTGSAK FKRLIKEEKY SEALDVARQQ VESGAQIIDI NMDEGMLDAE AAMVRFLSLI
AGEPDIARVP IMIDSSKWEV IEKGLKCIQG KGIVNSISMK EGVEAFIHHA KLLRRYGAAV
VVMAFDEQGQ ADTRERKIEI CRRAYKILTE EVGFPPEDII FDPNIFAVAT GIEEHNNYAQ
DFIGACEDIK RELPHALISG GVSNVSFSFR GNDPVREAIH AVFLYYAIRN GMDMGIVNAG
QLAIYDDLPA ELRDAVEDVI LNRRDDGTER LLDLAEKYRG SKTDEAANAQ QAEWRSWDVK
KRLEYSLVKG ITEFIEQDTE EARQQASRPI EVIEGPLMDG MNVVGDLFGE GKMFLPQVVK
SARVMKQAVA YLEPFIEASK EKGSSNGKMV IATVKGDVHD IGKNIVGVVL QCNNYEIVDL
GVMVPAEKIL RTAREVNADL IGLSGLITPS LDEMVNVAKE MERQGFTIPL LIGGATTSKA
HTAVKIEQNY SGPTVYVQNA SRTVGVVAAL LSDTQRDDFV ARTRKEYETV RIQHARKKPR
TPPVTLEAAR DNDLAFDWER YTPPVAHRLG VQEVEASIET LRNYIDWTPF FMTWSLAGKY
PRILEDEVVG VEAQRLFKDA NDMLDKLSAE KLLNPRGVVG LFPANRVGDD IEIYRDETRT
HVLTVSHHLR QQTEKVGFAN YCLADFVAPK LSGKADYIGA FAVTGGLEED ALADAYEAQH
DDYNKIMVKA IADRLAEAFA EYLHERVRKV YWGYAPNESL SNDELIRENY QGIRPAPGYP
ACPEHTEKGT IWQLLDVEKH TGMKLTESFA MWPGASVSGW YFSHPESKYF AVAQIQRDQV
TDYAFRKGMS VENVERWLAP NLGYDAD
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