| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A4364 |
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| Symbol | rpoB |
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| ID | 6519899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | + |
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| Start bp | 4233232 |
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| End bp | 4237260 |
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| Gene Length | 4029 bp |
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| Protein Length | 1342 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642749317 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_002117056 |
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| Protein GI | 194737028 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.4876 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTTACT CCTATACCGA GAAAAAACGT ATTCGTAAGG ATTTTGGTAA ACGTCCACAA
GTTCTGGATG TACCTTATCT CCTTTCTATC CAGCTTGACT CGTTTCAGAA GTTTATCGAG
CAAGATCCTG AAGGGCAGTA CGGCCTGGAA GCAGCCTTCC GTTCCGTGTT CCCGATTCAG
AGCTACAGCG GTAATTCCGA GCTGCAGTAC GTCAGCTACC GCCTTGGCGA ACCGGTGTTT
GACGTTCAGG AATGTCAGAT CCGTGGCGTG ACCTATTCCG CACCGCTGCG CGTAAAACTG
CGTCTGGTGA TCTACGAGCG CGAAGCGCCG GAAGGCACCG TTAAAGACAT TAAAGAACAA
GAAGTCTACA TGGGCGAAAT TCCGCTCATG ACCGACAACG GTACCTTTGT TATCAACGGT
ACTGAGCGTG TTATCGTTTC TCAGCTGCAC CGTAGTCCGG GCGTCTTCTT TGACTCCGAC
AAAGGTAAAA CCCACTCTTC GGGTAAAGTG CTGTATAACG CGCGCATCAT TCCTTACCGT
GGTTCCTGGC TGGACTTCGA ATTCGATCCG AAGGACAACC TGTTCGTGCG TATCGACCGT
CGCCGTAAAC TGCCTGCGAC CATCATCCTG CGTGCGCTGA ACTACACCAC TGAGCAGATC
CTTGACCTGT TCTTTGAGAA AGTCGTCTTC GAAATTCGCG ACAACAAACT GCAGATGGAG
CTGATTCCAG AACGTCTGCG TGGCGAAACC GCGTCGTTCG ATATCGAAGC TAACGGCAAA
GTGTACGTTG AAAAAGGCCG TCGCATTACC GCGCGTCACA TCCGTCAGCT GGAAAAAGAC
GATATCAAGC ATATCGAAGT TCCGGTTGAG TACATCGCAG GTAAAGTCGT CTCTAAAGAC
TACGTTGACG AATCCACTGG CGAGCTGATC TGCGCGGCGA ACATGGAGCT GAGCCTGGAT
CTGCTGGCTA AGCTGAGCCA GTCCGGCCAC AAGCGTATCG AAACGCTGTT TACCAACGAT
CTGGACCACG GCCCGTACAT TTCTGAAACG GTACGCGTCG ACCCAACTAA CGATCGTTTG
AGCGCGCTGG TAGAAATCTA TCGCATGATG CGCCCTGGTG AGCCGCCGAC TCGTGAAGCG
GCTGAAAGCC TGTTTGAGAA CCTGTTCTTC TCCGAAGACC GCTATGACCT GTCTGCGGTG
GGTCGTATGA AGTTCAACCG TTCTCTGCTG CGCGACGAAA TCGAAGGTTC TGGTATCCTG
AGCAAAGACG ACATCATTGA TGTCATGAAG AAGCTCATCG ATATCCGTAA CGGTAAAGGC
GAAGTGGATG ATATCGACCA CCTCGGCAAC CGTCGTATCC GTTCCGTCGG CGAAATGGCG
GAAAACCAGT TCCGCGTTGG CCTGGTGCGT GTAGAGCGTG CGGTGAAAGA GCGTCTGTCT
CTGGGCGATC TGGATACCCT GATGCCTCAG GATATGATCA ACGCCAAGCC GATTTCCGCG
GCAGTGAAAG AGTTCTTTGG TTCCAGCCAG CTGTCTCAGT TTATGGACCA GAACAACCCG
CTGTCTGAGA TTACGCACAA ACGTCGTATC TCCGCACTCG GCCCAGGCGG TCTGACCCGC
GAACGCGCAG GCTTCGAAGT TCGAGACGTA CACCCGACGC ACTACGGTCG CGTATGTCCA
ATCGAAACGC CGGAAGGTCC GAACATCGGT CTGATCAACT CCCTGTCCGT GTACGCACAG
ACTAACGAAT ATGGCTTCCT TGAGACGCCG TACCGTCGTG TGGTTGATGG CGTGGTCACT
GACGAAATTC ATTACCTGTC TGCTATCGAA GAAGGCAACT ACGTTATCGC TCAGGCGAAC
TCCAACCTGG ATGACGAAGG CCACTTTGTA GAAGATCTGG TTACCTGCCG TAGCAAAGGC
GAATCCAGCT TGTTCAGCCG TGACCAGGTT GACTACATGG ACGTTTCCAC CCAGCAGGTG
GTCTCCGTCG GTGCGTCCCT GATCCCGTTC CTGGAACACG ATGACGCCAA CCGTGCATTG
ATGGGTGCGA ACATGCAACG TCAGGCGGTT CCGACTCTGC GTGCTGATAA GCCGCTGGTG
GGTACCGGTA TGGAACGTGC TGTCGCCGTC GACTCCGGTG TTACTGCAGT AGCTAAACGT
GGCGGTACTG TTCAGTACGT GGATGCGTCC CGTATCGTTA TCAAAGTTAA CGAAGACGAG
ATGTACCCGG GTGAAGCAGG TATCGACATC TATAACCTGA CCAAATACAC CCGCTCTAAC
CAGAACACCT GTATCAACCA GATGCCATGT GTGTCTCTGG GCGAGCCGGT TGAACGCGGC
GACGTGCTGG CAGACGGTCC GTCCACCGAC CTCGGTGAAC TGGCGCTCGG TCAGAACATG
CGCGTGGCGT TCATGCCGTG GAACGGCTAC AACTTCGAAG ACTCCATCCT CGTATCCGAG
CGTGTTGTCC AGGAAGACCG TTTCACCACC ATCCACATTC AGGAACTGGC GTGCGTGTCC
CGTGACACCA AGCTGGGGCC GGAAGAGATC ACCGCTGATA TCCCGAACGT GGGTGAAGCT
GCGCTCTCCA AACTGGATGA ATCCGGTATC GTTTACATCG GCGCGGAAGT GACCGGCGGT
GACATTCTGG TCGGTAAGGT GACGCCGAAA GGTGAAACCC AACTGACGCC GGAAGAGAAA
CTGCTGCGTG CGATCTTCGG TGAGAAAGCG TCTGACGTTA AAGACTCTTC TCTGCGCGTA
CCTAACGGTG TCTCCGGTAC GGTTATCGAC GTTCAGGTCT TTACTCGCGA TGGCGTAGAA
AAAGACAAAC GTGCTTTGGA AATCGAAGAG ATGCAGCTCA AGCAGGCGAA AAAAGACCTG
TCTGAAGAAC TGCAGATCCT CGAAGCGGGC CTGTTTAGCC GTATCCGTGC GGTGCTGGTT
TCCGGCGGCG TTGAAGCTGA GAAGCTCGAC AAACTGCCGC GCGACCGCTG GCTGGAACTC
GGTCTGACCG ACGAAGAGAA ACAAAATCAG CTGGAACAAC TGGCTGAGCA GTATGACGAA
CTGAAACACG AGTTCGAGAA AAAACTTGAA GCGAAGCGCC GTAAAATCAC CCAGGGCGAC
GATCTGGCGC CGGGCGTGCT GAAGATCGTG AAGGTCTATC TGGCCGTTAA ACGCCGTATC
CAGCCGGGTG ATAAGATGGC AGGTCGTCAC GGTAACAAGG GTGTTATCTC TAAGATCAAC
CCGATCGAAG ACATGCCTTA CGATGAAAAC GGCACGCCGG TAGACATCGT ACTGAACCCG
CTGGGCGTAC CGTCTCGTAT GAACATCGGT CAGATTCTGG AAACCCACCT GGGTATGGCT
GCGAAAGGTA TCGGCGATAA GATCAACGCC ATGCTGAAAC AGCAGCAGGA AGTCGCGAAA
CTGCGCGAAT TCATCCAGCG TGCCTACGAT CTGGGCGCCG ACGTTCGTCA GAAAGTCGAC
CTGAGCACCT TCAGCGATGA TGAAGTGCTG CGTCTGGCAG AAAACCTGCG TAAAGGTATG
CCGATTGCCA CACCAGTGTT TGACGGTGCG AAAGAAGCGG AAATCAAAGA GCTGCTGAAA
CTGGGCGACC TGCCGACCTC CGGTCAGATC ACCCTGTTCG ATGGCCGTAC GGGTGAACAG
TTCGAACGTC CGGTAACCGT CGGTTACATG TACATGCTGA AACTGAACCA CCTGGTTGAT
GACAAGATGC ATGCGCGTTC TACCGGTTCT TACAGCCTGG TTACTCAGCA GCCGCTGGGT
GGTAAGGCGC AGTTCGGTGG TCAGCGCTTC GGGGAGATGG AAGTGTGGGC GCTGGAAGCT
TACGGCGCCG CCTACACCCT GCAGGAAATG CTCACCGTTA AGTCTGATGA CGTGAACGGC
CGTACTAAGA TGTATAAGAA CATCGTGGAC GGCAACCATC AGATGGAACC GGGTATGCCG
GAATCCTTCA ACGTTCTGTT GAAAGAGATC CGCTCGCTGG GCATCAACAT CGAACTGGAA
GACGAGTAA
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| Protein sequence | MVYSYTEKKR IRKDFGKRPQ VLDVPYLLSI QLDSFQKFIE QDPEGQYGLE AAFRSVFPIQ
SYSGNSELQY VSYRLGEPVF DVQECQIRGV TYSAPLRVKL RLVIYEREAP EGTVKDIKEQ
EVYMGEIPLM TDNGTFVING TERVIVSQLH RSPGVFFDSD KGKTHSSGKV LYNARIIPYR
GSWLDFEFDP KDNLFVRIDR RRKLPATIIL RALNYTTEQI LDLFFEKVVF EIRDNKLQME
LIPERLRGET ASFDIEANGK VYVEKGRRIT ARHIRQLEKD DIKHIEVPVE YIAGKVVSKD
YVDESTGELI CAANMELSLD LLAKLSQSGH KRIETLFTND LDHGPYISET VRVDPTNDRL
SALVEIYRMM RPGEPPTREA AESLFENLFF SEDRYDLSAV GRMKFNRSLL RDEIEGSGIL
SKDDIIDVMK KLIDIRNGKG EVDDIDHLGN RRIRSVGEMA ENQFRVGLVR VERAVKERLS
LGDLDTLMPQ DMINAKPISA AVKEFFGSSQ LSQFMDQNNP LSEITHKRRI SALGPGGLTR
ERAGFEVRDV HPTHYGRVCP IETPEGPNIG LINSLSVYAQ TNEYGFLETP YRRVVDGVVT
DEIHYLSAIE EGNYVIAQAN SNLDDEGHFV EDLVTCRSKG ESSLFSRDQV DYMDVSTQQV
VSVGASLIPF LEHDDANRAL MGANMQRQAV PTLRADKPLV GTGMERAVAV DSGVTAVAKR
GGTVQYVDAS RIVIKVNEDE MYPGEAGIDI YNLTKYTRSN QNTCINQMPC VSLGEPVERG
DVLADGPSTD LGELALGQNM RVAFMPWNGY NFEDSILVSE RVVQEDRFTT IHIQELACVS
RDTKLGPEEI TADIPNVGEA ALSKLDESGI VYIGAEVTGG DILVGKVTPK GETQLTPEEK
LLRAIFGEKA SDVKDSSLRV PNGVSGTVID VQVFTRDGVE KDKRALEIEE MQLKQAKKDL
SEELQILEAG LFSRIRAVLV SGGVEAEKLD KLPRDRWLEL GLTDEEKQNQ LEQLAEQYDE
LKHEFEKKLE AKRRKITQGD DLAPGVLKIV KVYLAVKRRI QPGDKMAGRH GNKGVISKIN
PIEDMPYDEN GTPVDIVLNP LGVPSRMNIG QILETHLGMA AKGIGDKINA MLKQQQEVAK
LREFIQRAYD LGADVRQKVD LSTFSDDEVL RLAENLRKGM PIATPVFDGA KEAEIKELLK
LGDLPTSGQI TLFDGRTGEQ FERPVTVGYM YMLKLNHLVD DKMHARSTGS YSLVTQQPLG
GKAQFGGQRF GEMEVWALEA YGAAYTLQEM LTVKSDDVNG RTKMYKNIVD GNHQMEPGMP
ESFNVLLKEI RSLGINIELE DE
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