Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A4341 |
Symbol | btuB |
ID | 6518524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 4215322 |
End bp | 4217166 |
Gene Length | 1845 bp |
Protein Length | 614 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642749295 |
Product | vitamin B12/cobalamin outer membrane transporter |
Protein accession | YP_002117042 |
Protein GI | 194736845 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4206] Outer membrane cobalamin receptor protein |
TIGRFAM ID | [TIGR01779] TonB-dependent vitamin B12 receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.139999 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.582372 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAAAA AAGCTACGCT GCTGACGGCG TTCTCCGTCA CGGCCTTTTC CGCTTGGGCG CAGGACACTA GCCCGGATAC CCTGGTTGTC ACCGCCAACC GTTTTCAGCA GCCGCGCAGC GCGGTTCTGG CGCCCGTTAC CATCGTGACG CGTCAGGATA TTGAACGCTG GCAATCGACC TCCGTAAATG ATGTTCTGCG CCGTTTGCCT GGCGTCGATA TTGCGCAGAG CGGCGGCGCC GGACAAAACT CCTCCATTTT CATTCGCGGC ACCAACTCCA GCCATGTACT GGTATTGATT GACGGCGTGC GTCTGAATTT AGCAGGCGTG AGCGGGTCCG CCGATCTCAG CCAGTTCCCG GTGTCGCTGG TACAGCGCAT TGAATATATT CGCGGTCCGC GCTCCGCTAT TTATGGTTCC GATGCTATCG GCGGCGTAGT GAATATCATT ACGACGCGCG ATAACCCAGG CACAGAATTA ACCGCTGGGT GGGGAAGCAA TAGCTACCAG AATTACGACA TCTCGACGCA ACAGCAACTT GGCGAAAACA CGCGGGCGAC GTTGATCGGC GATTACGAAT ACACCAAAGG GTTTGACGTG GTAGCGAAAG GCGGTACCGG GATGCAGGCG CAGCCTGACC GGGACGGCTT TTTGAGTAAA ACGCTTTATG GCGCGTTAGA GCATACCTTT TCTGAGCGCT GGAGCGGATT CGTGCGTGGT TATGGCTACG ATAACCGTAC CGATTACGAC GCCTATTACT CGCCGGGCTC GCCGCTGATT GATACACGCA AACTTTATAG CCAAAGCTGG GACGCCGGGC TGCGCTTTAA TGGCGAACGT ATTCAGTCTC AGCTGGTTTC AAGCTATAGC CACAGTAAAG ATTACAACTA TGATCCGCAC TATGGCCGGT ATGATACCTC CGCCACGCTG GATGAGATGA AACAGTACAA TGTTCAATGG ACCAACAGTG TGGTCGTGGG GCACGGTAAT GTTGGGGCGG GCGTAGACTG GCAGAAACAG ACTACCACGC CAGGTACCGG CTATGTGCCC GAGGGATATG ACCAGCGTAA TACTGGGGTT TACCTGACAG GATTACAACA ATTGGGTGAC TTCACTCTGG AAGCGGCGGC GCGCAGTGAT GACAACTCCC AGTTTGGTCG TCATGGTACA TGGCAAACCA GCGCGGGATG GGAGTTTATA GAAGGTTATC GCTTTATTGC CTCCTACGGA ACCTCCTACA AAGCGCCTAA TTTGGGCCAA CTGTATGGTT ATTATGGTAA TCCGAACCTG AATCCTGAAA AGAGTAAACA GTGGGAAGGC GCATTTGAAG GGCTAACCGC TGGCGTCAGC TGGCGTATTT CAGGTTATCG TAACGATATT AATGACATGA TCGATTATGA CGATCATCTG CAAAAATATT ACAACGAAGG CAAGGCGCGC ATTAAAGGTA TTGAGGCGAC GGCGAATTTC GATACCGGAC CGTTAACGCA TACGGTCAGT TATGATTACG TTGATGCGCG TAATGCGATT ACTGATACGC CATTACCCCG GCGTTCCAAA CAGATGGCAA AATATCAACT TGACTGGGAC GTTTACGATT TTGACTGGGG GGTGACATAT CAATACCTTG GTTCCCGCTA TGATTCGGAC TACTCCGCTT ACCCATACCG GACAGTAAAA ATGGGCGGCG TCAGTTTATG GGATCTTACG GTTGCATATC CGGTCACCTC ACATCTGACA GTTCGTGGTA AAATAGCCAA CCTGTTCGAC AAAGATTACG AGACAGTTTA TGGCTACCAA ACTGCAGGAC GAGAATACAC CTTGTCTGGC AGCTACACCT TCTGA
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Protein sequence | MIKKATLLTA FSVTAFSAWA QDTSPDTLVV TANRFQQPRS AVLAPVTIVT RQDIERWQST SVNDVLRRLP GVDIAQSGGA GQNSSIFIRG TNSSHVLVLI DGVRLNLAGV SGSADLSQFP VSLVQRIEYI RGPRSAIYGS DAIGGVVNII TTRDNPGTEL TAGWGSNSYQ NYDISTQQQL GENTRATLIG DYEYTKGFDV VAKGGTGMQA QPDRDGFLSK TLYGALEHTF SERWSGFVRG YGYDNRTDYD AYYSPGSPLI DTRKLYSQSW DAGLRFNGER IQSQLVSSYS HSKDYNYDPH YGRYDTSATL DEMKQYNVQW TNSVVVGHGN VGAGVDWQKQ TTTPGTGYVP EGYDQRNTGV YLTGLQQLGD FTLEAAARSD DNSQFGRHGT WQTSAGWEFI EGYRFIASYG TSYKAPNLGQ LYGYYGNPNL NPEKSKQWEG AFEGLTAGVS WRISGYRNDI NDMIDYDDHL QKYYNEGKAR IKGIEATANF DTGPLTHTVS YDYVDARNAI TDTPLPRRSK QMAKYQLDWD VYDFDWGVTY QYLGSRYDSD YSAYPYRTVK MGGVSLWDLT VAYPVTSHLT VRGKIANLFD KDYETVYGYQ TAGREYTLSG SYTF
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