| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A4282 |
|---|
| Symbol | |
|---|
| ID | 6516381 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | + |
|---|
| Start bp | 4152653 |
|---|
| End bp | 4153987 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642749241 |
|---|
| Product | sugar (Glycoside-Pentoside-Hexuronide) transporter |
|---|
| Protein accession | YP_002116988 |
|---|
| Protein GI | 194735102 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
|---|
| TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.368763 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTTT CTATCGTGGA AAAAATCGGC TTCGGCGCGG GAGATATGGC GATAAACGTT
GTGATTATCG CCATGCAGCT GCTCCTCGCC TATTTCTATA CCGATATCTA CGGCCTGAGC
GCCGCTGATG TTGGCGTACT GTTTGTGGTT GTGCGGATGA TTGATGCCAT TATCGATCCG
GCCATGGGGG TTCTGACCGA TAAACTGAAC ACGCGCTGGG GGCGTTACCG CCCGTGGCTG
CTGTGGTTTG CCATTCCTTT TGGCTTTGCC GTTTATTTGA TGTTTATTAC GCCTGATATG
GCTTATATGG CCAAACTGGC ATGGGCCTAT GGCACCTATA TTCTTATGAC CCTGGTCTAT
ACCGCGATCA CCATTCCCTA TATTTCGATG ATTGGCGTGA TTACCAGCGA CCCCGTCGAA
CGGTTAAGCG CCAACGGTTA TCGTTTTGTG ATGACCAAGA TTGCCGCTTT CCTGGTGACT
ATCGTCGTAC CGATGCTTGC CGTCTGGCTG GGGCAGGGCA ACAAGGCGCT GGGCTATCAG
TTTTCGATGG GGCTGATGGG GGCGATGGGC GCCCTGCTGT TTATCTTCTG TTTTCTTACC
ACGCGTGAAC GCAGCGAGCC GGAAATTACC TCGCTATCGG TGGGGAAACA GTTTAAATAT
CTGTTACGTA ACGATCAGTG GATTATTCTC GGCGTTGTTA TTCTGCTGCT GATGTGCGGT
TATGTTATTC GCGGTTCCGT TGCCGCTTAT TACGCTAAGT ATTATCTGAA CGGCGGAGAT
AACCTGATTT CACCCTTCCT GACTACCGGC GTCATCGCTT CAATTTTAGC GATGATCGCC
ACCACCTGGA TAACCAAGTT CTGGGACAAA ATTAAGATGT TCCGCTACAC CCAGATTATT
ACCTTTGTCC TGAGCGCGCT GATGTATTTC TCCGTCGGGC GTGAAAATCT TGTCCTGGCG
TTTGCGTTCT ATTTTCTTAT TAATTTCTTC TGCGATATGC AAATGCCGGT GTTCTGGTCC
TCTATCGCCG AAGCGGTGGA TTACGGAGAA AAGAAAACCG GCCTGCGCGT TTCCGGGTTG
GCGTTTGGCG GCATCCTCTT CTTCCAGAAG TTTGGGATGG GGATCGCGGG CGGGATACTC
GGATTCCTGC TGAGCCACTT TGGCTATCAG GCCGATGTTG AACAGACCGC ACGTTCGCTC
ACCGGTATTG CGCTGATGAT GACGCTCATT CCGGCTCTGT TCCACCTTGC GGTTGGGCTG
CTTATGAAAA AGTATCTGAT TAATAATGAA TATTATCGAG ATATTCAGCT TGCCCTGGCG
CAGAAACAGG CATAA
|
|---|
| Protein sequence | MKLSIVEKIG FGAGDMAINV VIIAMQLLLA YFYTDIYGLS AADVGVLFVV VRMIDAIIDP
AMGVLTDKLN TRWGRYRPWL LWFAIPFGFA VYLMFITPDM AYMAKLAWAY GTYILMTLVY
TAITIPYISM IGVITSDPVE RLSANGYRFV MTKIAAFLVT IVVPMLAVWL GQGNKALGYQ
FSMGLMGAMG ALLFIFCFLT TRERSEPEIT SLSVGKQFKY LLRNDQWIIL GVVILLLMCG
YVIRGSVAAY YAKYYLNGGD NLISPFLTTG VIASILAMIA TTWITKFWDK IKMFRYTQII
TFVLSALMYF SVGRENLVLA FAFYFLINFF CDMQMPVFWS SIAEAVDYGE KKTGLRVSGL
AFGGILFFQK FGMGIAGGIL GFLLSHFGYQ ADVEQTARSL TGIALMMTLI PALFHLAVGL
LMKKYLINNE YYRDIQLALA QKQA
|
|---|
| |