Gene SeSA_A4228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4228 
Symbol 
ID6516420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp4105574 
End bp4106956 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content53% 
IMG OID642749190 
Productinner membrane symporter YihP 
Protein accessionYP_002116937 
Protein GI194735020 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2211] Na+/melibiose symporter and related transporters 
TIGRFAM ID[TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAAA CATCATCGAA TCCGGCAACC CTACGCTTGC CGTTTAAAGA AAAACTTGCC 
TATGGACTGG GGGATTTAGG TTCCAATATC CTGTTAGATA TCGGGACCCT CTATTTACTC
AAATTTTATA CCGATGTGCT GGGTTTACCA GGGACTTACG GCGGGATCAT TTTCCTGATC
GCCAAATTTT TTACCGCATT TACCGATATG GGTACCGGCA TTATGCTCGA CTCGCGGCGT
AAAATTGGTC CGAAGGGCAA ATTCCGCCCG TTCGTGCTTT ACGCGGCATT TCCGGTAACG
CTACTGGCGA TTGCTAACTT TGTCGGCACA CCGTTTGAGG TGACGGGAAA AACCGTCGTC
GCAACGATGC TGTTTATGCT GTATGGGCTG GTTTTCAGCA TGATGAACTG CTCGTATGGC
GCGATGGTGC CCGCGATTAC CAAGAACCCG GATGAACGCG CCTCGCTTGC CGCGTGGCGT
CAGGGCGGCG CCACTCTCGG CCTGCTGCTG TGTACCGTTG GCTTTGTGCC GGTCATGAAC
CTGATCGAAG GCAATGCCCA ACTCAGCTAT ATTTTCGCCG CCACGCTATT TTCATTGTTT
GGCCTGCTAT TTATGTGGCT GTGCTACGCC GGCGTTAAAG AGCGCTACGT CGAAGTGAAA
CCTGTCGATA ACGCGCAAAA GCCCGGATTA TTGCAGTCGT TCCGCGCCAT CGCCGGTAAC
CGTCCGCTGT TTATTCTGTG TATCGCCAAC CTTTGTACTC TCGGCGCCTT CAACGTCAAA
CTGGCGATTC AGGTTTATTA CACCCAGTAC GTTCTTAACG ACCCGATCCT CCTCTCCTGG
ATGGGCTTCT TTAGCATGGG CTGTATTTTT ATCGGCGTCT TTTTGATGCC CGGCGCTGTA
AGGCGTTTTG GCAAGAAGAA AGTCTATATC GGCGGGCTGT TAATATGGGT GGCGGGCGAT
CTGCTCAACT ACTTCTTTGG CGGCGGCTCG GTCAGTTTTG TCGCCTTCTC CTGCCTGGCG
TTCTTCGGTT CCGCCTTCGT CAACAGCCTG AACTGGGCGC TGGTTTCCGA CACGGTGGAG
TACGGTGAAT GGCGCACCGG CGTCCGCTCG GAAGGGACGG TTTACACCGG CTTCACCTTC
TTCCGTAAGG TCTCCCAGGC GCTGGCAGGG TTCTTCCCCG GCTGGATGCT GACGCAAATC
GGTTATATCC CGAATGTGGT GCAATCGGCA GGCACCGTCG AAGGCCTACG CCAGTTGATC
TTTATTTATC CTTGCGTGCT GGCGGTCATC ACCATTATTG CGATGGGCTG TTTCTACAAC
CTCAACGAGA AGATGTACGT GCGAATTGTG GAAGAGATTG AGGCCCGGAA ACATACGGTT
TAA
 
Protein sequence
MSQTSSNPAT LRLPFKEKLA YGLGDLGSNI LLDIGTLYLL KFYTDVLGLP GTYGGIIFLI 
AKFFTAFTDM GTGIMLDSRR KIGPKGKFRP FVLYAAFPVT LLAIANFVGT PFEVTGKTVV
ATMLFMLYGL VFSMMNCSYG AMVPAITKNP DERASLAAWR QGGATLGLLL CTVGFVPVMN
LIEGNAQLSY IFAATLFSLF GLLFMWLCYA GVKERYVEVK PVDNAQKPGL LQSFRAIAGN
RPLFILCIAN LCTLGAFNVK LAIQVYYTQY VLNDPILLSW MGFFSMGCIF IGVFLMPGAV
RRFGKKKVYI GGLLIWVAGD LLNYFFGGGS VSFVAFSCLA FFGSAFVNSL NWALVSDTVE
YGEWRTGVRS EGTVYTGFTF FRKVSQALAG FFPGWMLTQI GYIPNVVQSA GTVEGLRQLI
FIYPCVLAVI TIIAMGCFYN LNEKMYVRIV EEIEARKHTV