Gene SeSA_A4193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4193 
SymboltrkH 
ID6515824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp4072055 
End bp4073506 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content53% 
IMG OID642749159 
Productpotassium transporter 
Protein accessionYP_002116911 
Protein GI194734162 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0168] Trk-type K+ transport systems, membrane components 
TIGRFAM ID[TIGR00933] potassium uptake protein, TrkH family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000606727 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.556467 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTTTC GCGCCATTAC CCGAATCGTT GGACTACTGG TTATCTTATT TTCGGGGACA 
ATGATTCTCC CGGGACTGGT AGCGCTAATA TATCGTGATG GCGCAGGAAG AGCGTTCACG
CAGACCTTTT TTGTCGCGCT GGCGATCGGT TCCATACTGT GGTGGCCGAA CCGTAGGGAA
AAGGGCGAGC TGAAATCCCG CGAAGGATTT CTTATCGTGG TGCTGTTCTG GACCGTGCTG
GGCAGCGTGG GTGCGCTGCC GTTTATTTTC TCGGAAAGCC CAAACCTCAC CATTACCGAT
GCTTTTTTTG AATCGTTCTC CGGGTTAACC ACCACGGGCG CCACTACGCT GGTGGGGCTG
GATTCATTAC CGCACGCCAT TCTCTTTTAT CGTCAGATGC TGCAATGGTT TGGCGGTATG
GGGATCATTG TGCTGGCGGT GGCGATTCTC CCTATCCTCG GCGTCGGGGG GATGCAGCTC
TATCGGGCAG AAATGCCGGG GCCGTTGAAA GATAACAAAA TGCGCCCGCG TATTGCCGAG
ACGGCGAAAA CGCTGTGGCT TATCTATGTC TTGCTAACGG TAGCCTGCGC GCTGGCGCTA
TGGTTTGCAG GGATGCCTGC GTTTGACGCT ATCGGACACA GCTTCTCCAC TATTGCTATC
GGCGGCTTCT CAACGCATGA CGCCAGCGTA GGCTATTTTG ATAGTCCCAC TATTAATACC
ATCATCGCTA TTTTCCTGCT GATCTCCGGT TGTAACTATG GCCTGCATTT CTCTTTATTA
AGCGGGCGTA GCCTGAAAGT ATACTGGCGC GATCCGGAAT TCCGCATGTT CATCGGCGTA
CAGTTGACGC TGGTGGTGAT CTGCACGCTG GTACTGTGGT TCCATAATAT CTACGACTCG
GCGCTGACAA CGCTAAATCA GGCGTTCTTC CAGGTTGTGT CGATGGCGAC AACGGCAGGG
TTTACCACGG ACAGCATTGC GCGCTGGCCG CTGTTTTTGC CCGTCTTGCT GCTATGTTCC
GCGTTTATTG GCGGTTGCGC CGGGTCAACG GGCGGGGGGT TAAAGGTCAT CCGTATTCTG
TTGTTGTTTA AACAGGGGAA CCGCGAACTC AAACGTCTGG TGCATCCGAA TGCCGTTTAC
AGTATTAAGC TGGGGAACCG GGCGCTGCCA GAACGTATTC TGGAAGCCGT CTGGGGATTC
TTTTCTGCCT ACGCGCTGGT ATTTATCGTC AGTATGCTGG CTATTATCGC TACAGGCGTA
GATGATTTCT CGGCTTTCGC CTCGGTAGTG GCTACGCTTA ATAACCTGGG ACCGGGGCTG
GGGGTGGTTG CTGATAACTT CGCCAGTATG AATCCGGTTG CGAAATGGAT ACTCATCGCC
AACATGCTAT TTGGTCGTCT GGAAGTATTC ACTTTGCTGG TACTTTTTAC CCCGACTTTC
TGGCGTGAAT AA
 
Protein sequence
MHFRAITRIV GLLVILFSGT MILPGLVALI YRDGAGRAFT QTFFVALAIG SILWWPNRRE 
KGELKSREGF LIVVLFWTVL GSVGALPFIF SESPNLTITD AFFESFSGLT TTGATTLVGL
DSLPHAILFY RQMLQWFGGM GIIVLAVAIL PILGVGGMQL YRAEMPGPLK DNKMRPRIAE
TAKTLWLIYV LLTVACALAL WFAGMPAFDA IGHSFSTIAI GGFSTHDASV GYFDSPTINT
IIAIFLLISG CNYGLHFSLL SGRSLKVYWR DPEFRMFIGV QLTLVVICTL VLWFHNIYDS
ALTTLNQAFF QVVSMATTAG FTTDSIARWP LFLPVLLLCS AFIGGCAGST GGGLKVIRIL
LLFKQGNREL KRLVHPNAVY SIKLGNRALP ERILEAVWGF FSAYALVFIV SMLAIIATGV
DDFSAFASVV ATLNNLGPGL GVVADNFASM NPVAKWILIA NMLFGRLEVF TLLVLFTPTF
WRE