| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A4185 |
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| Symbol | rfaH |
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| ID | 6517677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | - |
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| Start bp | 4061306 |
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| End bp | 4061794 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642749151 |
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| Product | transcriptional activator RfaH |
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| Protein accession | YP_002116903 |
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| Protein GI | 194736748 |
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| COG category | [K] Transcription |
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| COG ID | [COG0250] Transcription antiterminator |
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| TIGRFAM ID | [TIGR01955] transcriptional activator RfaH |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.143916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAATCCT GGTATTTACT GTACTGCAAA CGCGGGCAAC TTCAGCGTGC TCAGGAACAC
CTCGAAAGAC AAGCGGTAAG TTGCCTGACA CCGATGATCA CCCTGGAAAA AATGGTACGC
GGAAAACGTA CCTCCGTCAG CGAACCGCTC TTTCCTAATT ATCTGTTCGT TGAATTTGAT
CCGGAAGTGA TACATACCAC TACAATCAAC GCCACGCGCG GCGTCAGCCA TTTTGTGCGC
TTTGGCGCGC ATCCTGCGAT CGTGCCTTCC AGCGTTATTC ATCAGCTTTC TATCTACAAG
CCCGAAGGCG TTGTCGATCC TGAAACCCCC TATCCCGGCG ATAGCGTCAT CATCACGGAA
GGCGCATTTG AAGGGCTGAA AGCGATTTTT ACCGAACCGG ATGGCGAAAC GCGTTCGATG
TTACTGCTTA ATTTACTCAA TAAAGAAGTG AAGCAGAGCG TAAAAAACAC CGGTTTTCGC
AAGATTTAG
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| Protein sequence | MQSWYLLYCK RGQLQRAQEH LERQAVSCLT PMITLEKMVR GKRTSVSEPL FPNYLFVEFD
PEVIHTTTIN ATRGVSHFVR FGAHPAIVPS SVIHQLSIYK PEGVVDPETP YPGDSVIITE
GAFEGLKAIF TEPDGETRSM LLLNLLNKEV KQSVKNTGFR KI
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