Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A4157 |
Symbol | dapF |
ID | 6518625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 4031504 |
End bp | 4032328 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642749124 |
Product | diaminopimelate epimerase |
Protein accession | YP_002116876 |
Protein GI | 194735174 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0253] Diaminopimelate epimerase |
TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATTCT CTAAAATGCA TGGCCTTGGC AACGATTTTA TGGTCGTCGA CGCGGTAACG CAGAATGTCT TTTTTTCGCC GGAACTGATT CGTCGGCTAT CCGACAGACA CCTGGGCGTA GGGTTCGATC AGCTGCTGGT GGTTGAGCCG CCCTATGATC CTGAGTTGGA CTTTCATTAC CGCATCTTCA ACGCCGACGG CAGTGAAGTC TCGCAGTGCG GCAATGGCGC GCGCTGTTTC GCGCGATTTG TTCGCCTGAA AGGGCTAACC AATAAACGCG ATATTCGGGT CAGTACCGCG AATGGCCGGA TGGTACTGAG CGTCACGGAA GATGAACTGG TGCGGGTGAA TATGGGGGAG CCAAACTTTG AACCCGCGCA GGTGCCTTTT CGCGCCAACA AAGCGGAAAA GACGTATATT ATGCGAGCGG CGGAACAGAC CATACTGTGC GGCGTGGTTT CAATGGGCAA TCCGCACTGT GTCATTCAGG TTGATAATGT CGACACGGCG GCTGTTGAAA CACTGGGGCC GGTTCTGGAA AGCCATGAGC GTTTTCCGGA ACGCGCCAAC ATTGGTTTTA TGCAGGTTGT AAGACGTGAG CATATCCGGC TGCGAGTCTA TGAACGCGGC GCAGGGGAGA CCCGCGCGTG CGGCAGCGGC GCGTGCGCTG CCGTTGCCGT GGGGATTCAG CAGGGGCTGC TGGCTGAAGA AGTACGCGTG GAATTACCGG GCGGTCGGCT GGATATCGCC TGGAAAGGTC CGGGTCATCC GTTATACATG ACTGGTCCGG CGGCACATAT CTACGACGGA TTTATCCATT TATGA
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Protein sequence | MQFSKMHGLG NDFMVVDAVT QNVFFSPELI RRLSDRHLGV GFDQLLVVEP PYDPELDFHY RIFNADGSEV SQCGNGARCF ARFVRLKGLT NKRDIRVSTA NGRMVLSVTE DELVRVNMGE PNFEPAQVPF RANKAEKTYI MRAAEQTILC GVVSMGNPHC VIQVDNVDTA AVETLGPVLE SHERFPERAN IGFMQVVRRE HIRLRVYERG AGETRACGSG ACAAVAVGIQ QGLLAEEVRV ELPGGRLDIA WKGPGHPLYM TGPAAHIYDG FIHL
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