Gene SeSA_A4114 details

Gene Information

• Locus tag: SeSA_A4114
• Symbol: ilvD
• ID: 6519760
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633
• Kingdom: Bacteria
• Replicon accession: NC_011094
• Strand: +
• Start bp: 3988023
• End bp: 3989873
• Gene Length: 1851 bp
• Protein Length: 616 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 642749082
• Product: dihydroxy-acid dehydratase
• Protein accession: YP_002116838
• Protein GI: 194737799
• COG category: [E] Amino acid transport and metabolism; [G] Carbohydrate transport and metabolism
• COG ID: [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase
• TIGRFAM ID: [TIGR00110] dihydroxy-acid dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 33
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCTAAGT ACCGTTCCGC CACCACCACT CATGGTCGTA ATATGGCGGG TGCCCGCGCG 
CTGTGGCGCG CCACCGGAAT GACCGACAGT GATTTTGGCA AACCGATTAT CGCCGTGGTG 
AACTCATTCA CTCAGTTTGT GCCGGGTCAC GTTCATCTGC GCGATCTCGG TAAGCTGGTC 
GCCGAACAGA TTGAAGCTTC CGGCGGTGTG GCGAAAGAGT TCAACACTAT TGCCGTGGAT 
GACGGGATCG CCATGGGGCA CGGGGGTATG CTCTATTCAC TGCCGTCGCG CGAGCTGATC 
GCCGACTCCG TGGAGTACAT GGTGAACGCT CACTGCGCTG ACGCGATGGT GTGTATCTCT 
AACTGCGACA AAATCACCCC AGGGATGCTC ATGGCCTCGC TGCGCCTGAA TATTCCGGTG 
ATCTTTGTTT CCGGCGGACC GATGGAAGCC GGGAAAACCA AACTGTCCGA TCAGATCATC 
AAGCTCGATC TGGTTGATGC CATGATTCAG GGCGCGGACC CGAAAGTCTC TGACGATCAA 
AGTAACCAGG TTGAGCGCTC CGCGTGTCCA ACCTGCGGCT CCTGCTCCGG CATGTTTACC 
GCTAACTCCA TGAATTGCCT GACCGAAGCG CTGGGCCTGT CGCAGCCGGG CAACGGTTCG 
CTGCTGGCGA CCCATGCTGA CCGGAAGCAG TTGTTCCTCA ATGCCGGTAA GCGGATTGTT 
GAACTGACTA AACGCTATTA CGAGCAGGAT GACGAAAGTG CACTGCCGCG TAACATCGCC 
AGCAAAGCCG CGTTTGAGAA TGCGATGACG CTGGATATTG CGATGGGCGG TTCGACCAAT 
ACCGTTCTGC ATCTACTGGC GGCGGCGCAG GAAGCGGAAA TCGACTTCAC CATGAGTGAT 
ATCGACAAGC TGTCCCGCAA GGTGCCGCAG CTGTGTAAAG TGGCGCCAAG TACCCAGAAA 
TACCATATGG AAGACGTTCA CCGTGCCGGC GGTGTGCTGG GTATTTTAGG CGAGCTGGAT 
CGCGCCGGGC TGCTGAACCG CAACGTGAAA AACGTATTAG GCCTGACGCT GCCACAAACG 
CTGGAACAGT ACGACATCAC GGTTACGCAG GACGAAGCGG TTAAAAAAAT GTTCCGTGCT 
GGCCCTGCCG GTATTCGTAC TACCCAGGCA TTCTCGCAGG ATTGTCGCTG GGATTCGCTG 
GATGACGACC GCGCAGCGGG TTGCATCCGC TCGCTGGAAT ATGCCTATAG CAAAGACGGC 
GGTCTGGCGG TGCTGTATGG CAACTTCGCC GAAAACGGCT GCATCGTTAA AACCGCGGGC 
GTCGATGATA GCATCCTTAA ATTCACCGGC CCGGCGAAAG TATATGAAAG CCAGGACGAC 
GCGGTAGAGG CGATTCTCGG CGGCAAAGTA GTGGAAGGCG ATGTAGTCGT GATCCGCTAC 
GAAGGGCCGA AAGGCGGGCC GGGAATGCAG GAAATGCTCT ATCCGACCAG TTTCCTGAAG 
TCGATGGGGC TGGGCAAAGC CTGCGCGCTC ATCACCGATG GGCGTTTCTC CGGCGGTACT 
TCGGGTCTTT CCATCGGCCA CGTCTCGCCG GAAGCGGCCA GCGGCGGCAC TATTGCGCTG 
ATTGAAGATG GCGACACCAT TGCGATTGAT ATCCCGAACC GCAGCATTCA GTTGCAGTTG 
AACGAGGCTG AAATCGCCGC ACGCCGCGAG GCGCAAGAAG CTCGTGGCGA CAAAGCCTGG 
ACGCCGAAAA ATCGTCAGCG TCAGGTTTCG TTTGCCCTGC GTGCCTACGC CAGCCTGGCG 
ACCAGCGCCG ATAAAGGCGC GGTGCGCGAT AAATCGAAAC TGGGAGGTTG A 

 

Protein sequence

MPKYRSATTT HGRNMAGARA LWRATGMTDS DFGKPIIAVV NSFTQFVPGH VHLRDLGKLV 
AEQIEASGGV AKEFNTIAVD DGIAMGHGGM LYSLPSRELI ADSVEYMVNA HCADAMVCIS 
NCDKITPGML MASLRLNIPV IFVSGGPMEA GKTKLSDQII KLDLVDAMIQ GADPKVSDDQ 
SNQVERSACP TCGSCSGMFT ANSMNCLTEA LGLSQPGNGS LLATHADRKQ LFLNAGKRIV 
ELTKRYYEQD DESALPRNIA SKAAFENAMT LDIAMGGSTN TVLHLLAAAQ EAEIDFTMSD 
IDKLSRKVPQ LCKVAPSTQK YHMEDVHRAG GVLGILGELD RAGLLNRNVK NVLGLTLPQT 
LEQYDITVTQ DEAVKKMFRA GPAGIRTTQA FSQDCRWDSL DDDRAAGCIR SLEYAYSKDG 
GLAVLYGNFA ENGCIVKTAG VDDSILKFTG PAKVYESQDD AVEAILGGKV VEGDVVVIRY 
EGPKGGPGMQ EMLYPTSFLK SMGLGKACAL ITDGRFSGGT SGLSIGHVSP EAASGGTIAL 
IEDGDTIAID IPNRSIQLQL NEAEIAARRE AQEARGDKAW TPKNRQRQVS FALRAYASLA 
TSADKGAVRD KSKLGG