Gene SeSA_A4100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4100 
Symbol 
ID6518611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp3974977 
End bp3975681 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content51% 
IMG OID642749069 
Producttranscriptional regulator, GntR family 
Protein accessionYP_002116831 
Protein GI194738253 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.0000122034 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTAA GCGCACAACA ATTAGCCGCA CAGAAAAATC TATCCTATGT TCTGGCTGAA 
AAGCTGGCGC AGCGGATATT AAAGGGTGAC TACGCCCCTG GTACGATTCT TCCCGGCGAA 
ATAGAACTGG GCGAGCAGTA CGGCGTAAGT CGAACGGCAG TTCGCGAAGC GGTGAAAACG 
TTGACGGCTA AAGGTATGGT GCTACCCCGT CCGCGCATTG GTACGCGGGT GATGCCGCAG 
GGAAACTGGA ACTTTCTGGA TCAAGAGCTG CTGACCTGGT GGATGACGGA AGAAAATTTT 
CATCAGGTGG TAGATCATTT TCTGGTGATG CGTATTAGCC TGGAGCCGCA AGCCTGCCTG 
CTGGCGGCGA CTCTTGGCAC ACCGGAGCAG AAAGCGCGGC TTAATGCCTT AATGGAAGAG 
ATGGTCGCGC TGAAAAAGCA TTTTAAGCGT GAACGATGGA TTGAAGTGGA TATGGCATGG 
CACGAGCATA TCTACGAAAT GAGCGCCAAT CCCTTTCTAA TCTCTTTTGC GACGCTATTT 
CATTCGGTTT ATCACACTTA CTTTACCTCA ATCACCTATA ACGAGGTGGT AAAGCTGGAT 
TTGCACCAGG CCATTGTTGA TGCCATCGCT GATGGCGACG GCGAACGCGC TTTCCAGGCC 
TGCCAGGCGT TGTTAATAGC GCCCAATGAA AGACCAGATA ATTAA
 
Protein sequence
MPLSAQQLAA QKNLSYVLAE KLAQRILKGD YAPGTILPGE IELGEQYGVS RTAVREAVKT 
LTAKGMVLPR PRIGTRVMPQ GNWNFLDQEL LTWWMTEENF HQVVDHFLVM RISLEPQACL 
LAATLGTPEQ KARLNALMEE MVALKKHFKR ERWIEVDMAW HEHIYEMSAN PFLISFATLF 
HSVYHTYFTS ITYNEVVKLD LHQAIVDAIA DGDGERAFQA CQALLIAPNE RPDN