| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A4055 |
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| Symbol | trmE |
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| ID | 6515851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | + |
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| Start bp | 3928541 |
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| End bp | 3929905 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642749024 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_002116786 |
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| Protein GI | 194736496 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.765231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCATA ACGACACTAT CGTCGCCCAG GCAACCCCAC CGGGACGCGG TGGCGTGGGT
ATCCTGCGTA TCTCTGGTCT GAAGGCGCGC GACGTTGCGC AAGAGGTGCT GGGCAAGCTG
CCGAAGCCGC GCTATGCCGA CTACCTGCCG TTTAAAGACG TTGACGGCAG CGCGCTGGAT
CAGGGTATTG CGCTGTGGTT CCCCGGCCCG AACTCCTTCA CCGGTGAAGA TGTGCTGGAG
CTACAAGGGC ACGGCGGTCC GGTGATCCTG GACCTGCTGT TAAAACGTAT CCTGACGCTT
CCAGGCGTGC GCATTGCCCG ACCGGGCGAG TTCTCCGAGC GAGCGTTCCT CAACGATAAG
CTCGATTTAG CCCAGGCGGA AGCCATTGCC GACCTGATCG ATGCCAGTTC CGAACAGGCG
GCGCGTTCGG CGCTAAACTC GTTACAGGGG GCATTTTCCG CCCGCGTTAA CCACCTTGTG
GAAGCACTTA CTCACCTGCG AATCTACGTC GAAGCGGCTA TTGATTTTCC GGATGAGGAG
ATCGACTTTC TCTCTGACGG CAAAATCGAA GCGCAGCTCA ATGGCGTCAT CGCCGATCTT
GACGCCGTGC GCACCGAAGC GCGCCAGGGT AGCCTGCTGC GCGAAGGGAT GAAGGTAGTG
ATTGCCGGAC GCCCGAATGC CGGGAAATCC AGCCTGCTGA ATGCGCTGGC AGGCCGTGAA
GCTGCCATTG TCACCGATAT CGCCGGTACC ACGCGCGACG TGTTGCGCGA GCATATTCAC
ATCGACGGGA TGCCGCTGCA TATCATCGAT ACCGCCGGAC TGCGCGACGC CAGCGACGAA
GTTGAGCGTA TCGGCATCGA ACGCGCCTGG CAGGAGATTG AACAGGCCGA TCGCGTGCTG
TTTATGGTGG ATGGCACCAC GACGGACGCC GTTGACCCTG CCGACATCTG GCCGGACTTT
ATCGCCCGTC TGCCCAAAAA TCTACCGATT ACCGTGGTAC GTAACAAGGC GGATATCACC
GGCGAAACGC TGGGTATTAG TGAAGTAAAT GGTCACTCAC TGGTTCGCCT CTCGGCGCGT
ACCGGCGAAG GCGTCGACGT GCTGCGTAAC CACCTCAAGC AGAGCATGGG TTTTGATACC
AATATGGAAG GCGGCTTCCT GGCCCGCCGC CGTCACCTGC AGGCGCTGGC GGAAGCCGCT
GAACATCTTG AGCAGGGCAA AGCACAGCTA TTAGGCGCGT GGGCGGGGGA ACTGCTGGCG
GAAGAGTTGC GCCTGGCGCA GCAAAGCTTA AGCGAGATTA CCGGCGAGTT TACCTCCGAC
GACCTGCTGG GACGGATTTT CTCCAGCTTC TGTATCGGCA AATAA
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| Protein sequence | MSHNDTIVAQ ATPPGRGGVG ILRISGLKAR DVAQEVLGKL PKPRYADYLP FKDVDGSALD
QGIALWFPGP NSFTGEDVLE LQGHGGPVIL DLLLKRILTL PGVRIARPGE FSERAFLNDK
LDLAQAEAIA DLIDASSEQA ARSALNSLQG AFSARVNHLV EALTHLRIYV EAAIDFPDEE
IDFLSDGKIE AQLNGVIADL DAVRTEARQG SLLREGMKVV IAGRPNAGKS SLLNALAGRE
AAIVTDIAGT TRDVLREHIH IDGMPLHIID TAGLRDASDE VERIGIERAW QEIEQADRVL
FMVDGTTTDA VDPADIWPDF IARLPKNLPI TVVRNKADIT GETLGISEVN GHSLVRLSAR
TGEGVDVLRN HLKQSMGFDT NMEGGFLARR RHLQALAEAA EHLEQGKAQL LGAWAGELLA
EELRLAQQSL SEITGEFTSD DLLGRIFSSF CIGK
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