| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A3998 |
|---|
| Symbol | uhpC |
|---|
| ID | 6515773 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | - |
|---|
| Start bp | 3869426 |
|---|
| End bp | 3870754 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642748969 |
|---|
| Product | regulatory protein UhpC |
|---|
| Protein accession | YP_002116731 |
|---|
| Protein GI | 194737383 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | [TIGR00881] phosphoglycerate transporter family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTCGT TTTTAAAAGC CCCGGCCAAC GCGCCGCTCA TCACCGATAA GCACGAGGTT
GACGCCCGCT ATCGCTACTG GCGGCGGCAC ATCCTGATCA CCATTTGGTT GGGTTATGCG
CTGTTCTATT TCACCCGTAA AAGCTTTAAC GCCGCCGCGC CGGAAATCCT TGCCAGCGGC
ATTCTGACCC GCAGCGATAT CGGCCTGCTG GCGACGCTGT TTTACATCAC CTACGGGGTG
TCGAAATTTG TTTCCGGCAT CGTTAGCGAT CGCTCCAACG CTCGCTATTT TATGGGCATC
GGGCTGATTG CGACCGGCGT AGTGAATATT CTGTTCGGCT TCTCGACCTC GCTGTGGGCC
TTTGCTCTGC TATGGGCGTT GAATGCCTTT TTCCAGGGGT TTGGATCGCC GGTTTGCGCC
CGTTTGCTGA CCGCCTGGTA CTCGCGTACC GAACGCGGCG GCTGGTGGGC GTTATGGAAC
ACCGCGCATA ATGTCGGCGG GGCGCTGATC CCTCTCGTCA TGGCCGCTGT CGCCCTGCAT
TATGGCTGGC GCGTCGGAAT GATGGTGGCC GGATTGCTTG CCATCGGGGT GGGCATGGTC
CTCTGCTGGC GGCTGCGCGA CCGTCCGCAG GCGATTGGTT TACCGCCGGT AGGCGACTGG
CGGCACGATG CGCTGGAGGT AGCCCAACAG CAAGAGGGCG CGGGGCTAAG CCGCAAAGAA
ATCCTCGCTA AATATGTGCT GTTGAATCCC TATATCTGGC TGCTTTCGCT GTGTTACGTC
TTAGTGTACG TGGTGCGCGC GGCGATCAAT GACTGGGGCA ACCTGTATAT GTCCGAGACG
CTGGGCGTAG ATTTGGTCAC GGCCAACACG GCAGTATCGA TGTTTGAGCT GGGGGGATTT
ATCGGCGCGC TGGTGGCGGG CTGGGGCTCG GACAAACTCT TCAACGGCAA CCGCGGACCG
ATGAATTTAA TCTTCGCCGC CGGGATTCTG CTCTCTGTGG GTTCGCTGTG GCTGATGCCG
TTCGCCAGTT ACGTGATGCA GGCGGCCTGT TTCTTCACCA CCGGTTTCTT TGTTTTCGGC
CCGCAGATGC TCATTGGCAT GGCGGCGGCG GAGTGCTCGC ATAAAGAGGC GGCGGGCGCG
GCCACCGGCT TTGTCGGCCT GTTCGCCTAT CTCGGCGCGT CGCTTTCCGG CTGGCCGTTA
GCGAAAGTGC TGGAGATCTG GCACTGGACC GGTTTTTTTG CGGTCATCGC CATCGCGGCG
GGGATCTCCG CGCTATTGCT GCTGCCATTT CTGAACGCCC AGGCCCCACG CGAGACCAGC
GAAGCGTGA
|
|---|
| Protein sequence | MLSFLKAPAN APLITDKHEV DARYRYWRRH ILITIWLGYA LFYFTRKSFN AAAPEILASG
ILTRSDIGLL ATLFYITYGV SKFVSGIVSD RSNARYFMGI GLIATGVVNI LFGFSTSLWA
FALLWALNAF FQGFGSPVCA RLLTAWYSRT ERGGWWALWN TAHNVGGALI PLVMAAVALH
YGWRVGMMVA GLLAIGVGMV LCWRLRDRPQ AIGLPPVGDW RHDALEVAQQ QEGAGLSRKE
ILAKYVLLNP YIWLLSLCYV LVYVVRAAIN DWGNLYMSET LGVDLVTANT AVSMFELGGF
IGALVAGWGS DKLFNGNRGP MNLIFAAGIL LSVGSLWLMP FASYVMQAAC FFTTGFFVFG
PQMLIGMAAA ECSHKEAAGA ATGFVGLFAY LGASLSGWPL AKVLEIWHWT GFFAVIAIAA
GISALLLLPF LNAQAPRETS EA
|
|---|
| |