| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A3957 |
|---|
| Symbol | |
|---|
| ID | 6519022 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | - |
|---|
| Start bp | 3831247 |
|---|
| End bp | 3832629 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642748929 |
|---|
| Product | putative transporter |
|---|
| Protein accession | YP_002116692 |
|---|
| Protein GI | 194736843 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
|---|
| TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGTG AAATTCTCTC CGTTAAGGAG AAGATTGGCT ATGGTATGGG CGATGCCGCG
AGCCACATCA TCTTTGATAA CGTCATGTTA TATATGATGT TCTTCTATAC CGATATTTTC
GGCATTCCTG CTGGTTTTGT CGGCACCATG TTTTTACTGG CGCGTGCGCT TGATGCCATC
TCCGACCCTT GCATGGGCCT GCTGGCCGAC CGCACCCGCT CTCGCTGGGG CAAATTCCGA
CCCTGGGTGC TGTTTGGCGC GTTGCCGTTT GGTATCGTTT GTGTGCTGGC TTATAGCACG
CCGGATCTCA GTCTGAACGG CAAAATGATT TATGCCGCCA TCACCTACAC GTTGCTCACC
CTTCTGTACA CTGTGGTCAA CATCCCTTAC TGCGCGTTGG GGGGGGTAAT AACCAATGAC
CCAACGCAGC GTATCTCCCT GCAATCTTGG CGCTTTGTGC TGGCAACGGC GGGCGGAATG
CTCTCTACCG TACTGATGAT GCCTCTGGTG AAACTGATTG GCGGCGAGAA TAAGGCGCTG
GGCTTCCAGG GGGGTATCGC GGCGCTCTCG GTGGTGGCGT TCCTGATGCT GGCGTTCTGC
TTCTTTACCA CCAAAGAGCG CGTTGAAGCG CCTGCCACCC ATACCTCCAT GCGTGAAGAC
CTGCGTGATA TCTGGCACAA CGACCAGTGG CGCATAGTCG GCCTGCTCAC CATCCTGAAT
ATTCTGGCGG TATGCGTGCG CGGCGGGGCG ATGATGTATT ACGTCACCTG GATATTGGGC
AAGCCGGGCG TGTTTGTCGC CTTCCTCACC ACCTATTGCG TCGGCAACCT GATTGGCTCG
GCGCTGGCAA AACCGTTGAC CGACTGGAAA TGCAAAGTGA GCGTTTTCTG TTGGACCAAC
GCTTTACTCG CAGTAATCAG CGTGGCGATG TTCTTCGTAC CGATGCACGC CACGATCGCT
ATGTTCGTCT TTATCTTCGT GATTGGCGTG TTGCACCAGT TAGTCACGCC TATCCAGTGG
GTGATGATGT CTGACACCGT CGACTATGGC GAATGGTGTA ACGGCAAACG CCTGACGGGG
ATCAGTTTTG CCGGCACGTT GTTCGTGCTG AAACTGGGTC TTGCCCTCGG CGGGGCGCTG
ATTGGCTGGA TGCTGGCAGG CGGCGGTTAC GACGCGGCGG CGAAAACGCA AAACAGCGCC
ACGATCAGCA TCATCATCGC TCTGTTCACT ATCGTCCCGG CCATCTGTTA TCTGCTGAGC
GCCGCGATCG CTAAACGCTA CTACACCCTG AAAAGCCCGT TCCTGAAAAC CATTCTGGAA
CAACTGGCGC AGGGCGCACA CCGTAACGAA CAAGAATTTC CCCATAAAGA ATTGCAGAAC
TAA
|
|---|
| Protein sequence | MKSEILSVKE KIGYGMGDAA SHIIFDNVML YMMFFYTDIF GIPAGFVGTM FLLARALDAI
SDPCMGLLAD RTRSRWGKFR PWVLFGALPF GIVCVLAYST PDLSLNGKMI YAAITYTLLT
LLYTVVNIPY CALGGVITND PTQRISLQSW RFVLATAGGM LSTVLMMPLV KLIGGENKAL
GFQGGIAALS VVAFLMLAFC FFTTKERVEA PATHTSMRED LRDIWHNDQW RIVGLLTILN
ILAVCVRGGA MMYYVTWILG KPGVFVAFLT TYCVGNLIGS ALAKPLTDWK CKVSVFCWTN
ALLAVISVAM FFVPMHATIA MFVFIFVIGV LHQLVTPIQW VMMSDTVDYG EWCNGKRLTG
ISFAGTLFVL KLGLALGGAL IGWMLAGGGY DAAAKTQNSA TISIIIALFT IVPAICYLLS
AAIAKRYYTL KSPFLKTILE QLAQGAHRNE QEFPHKELQN
|
|---|
| |