Gene SeSA_A3948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3948 
Symbolgmk 
ID6515679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp3818260 
End bp3818883 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content50% 
IMG OID642748920 
Productguanylate kinase 
Protein accessionYP_002116683 
Protein GI194734961 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0194] Guanylate kinase 
TIGRFAM ID[TIGR03263] guanylate kinase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00531185 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTCAAG GTACGCTTTA TATTGTTTCT GCCCCCAGTG GCGCGGGTAA ATCCAGCCTG 
ATTCAGGCTT TATTAAAAAC CCAACCGTTG TATGACACTC AGGTTTCCGT TTCACATACC
ACGCGCGCGC CGCGTCCGGG TGAAGTGCAC GGTGAGCACT ATTTCTTTGT AAATCATGAT
GAGTTTAAAA CCATGATTGG CAGGGAGGCG TTTCTGGAGC ACGCGGAAGT GTTTGGCAAT
TACTACGGCA CTTCGCGCGA AACCATTGAG CAAGTGCTGG CAACCGGCGT TGATGTTTTT
CTGGATATCG ACTGGCAGGG CGCCCAGCAA ATTCGCGAAA AGATGCCGCA AGCACGCAGC
ATTTTTATTT TGCCGCCGTC AAAGATCGAA TTGGATCGCC GTTTACGCGG CCGCGGGCAA
GATAGCGAAG AAGTCATTGC CAAACGAATG GCGCAAGCGG TTGCAGAAAT GAGCCATTAC
GCCGAATATG ATTATCTTAT TGTGAATGAC GACTTTGATA CCGCGTTAAG CGACTTGAAA
ACCATCATTC GCGCTGAACG TCTGCGTATG AGCCGCCAAA AGCAGCGTCA TGACGCTTTA
ATCAGCAAAT TGTTGGCAGA CTGA
 
Protein sequence
MAQGTLYIVS APSGAGKSSL IQALLKTQPL YDTQVSVSHT TRAPRPGEVH GEHYFFVNHD 
EFKTMIGREA FLEHAEVFGN YYGTSRETIE QVLATGVDVF LDIDWQGAQQ IREKMPQARS
IFILPPSKIE LDRRLRGRGQ DSEEVIAKRM AQAVAEMSHY AEYDYLIVND DFDTALSDLK
TIIRAERLRM SRQKQRHDAL ISKLLAD