Gene SeSA_A3933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3933 
Symbolrph 
ID6517507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp3802765 
End bp3803481 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content55% 
IMG OID642748905 
Productribonuclease PH 
Protein accessionYP_002116668 
Protein GI194735193 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0689] RNase PH 
TIGRFAM ID[TIGR01966] ribonuclease PH 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.310122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones5 
Fosmid unclonability p-value0.0000391387 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTCCAG CAGGCCGTAG CGCTAATCAG GTGCGTCCCG TAACCCTGAC CCGTAACTAT 
ACAAAACACG CTGAAGGCTC GGTACTGGTC GAATTTGGAG ATACCAAAGT GTTGTGCACC 
GCCTCCATTG AAGAAGGCGT CCCACGTTTT CTGAAAGGAC AAGGCCAGGG GTGGATCACC 
GCAGAGTATG GCATGTTGCC TCGCGCTACC CATACCCGTA ATGCGCGTGA AGCAGCAAAG 
GGTAAGCAGG GCGGTCGTAC TATGGAAATT CAGCGTTTGA TCGCGCGTGC GCTGCGTGCG 
GCGGTCGATC TGAAAACGCT CGGCGAATTT ACCATTACGC TGGACTGCGA TGTAATCCAG 
GCCGATGGCG GTACGCGTAC AGCGTCTATT ACCGGTGCCT GCGTGGCGTT GGCGGATGCG 
CTGAATAAAT TGGTTGCCAA CGGTAAGCTG AAAACCAACC CGATGAAAGG CATGGTGGCG 
GCGGTTTCCG TAGGCATCGT TAACGGCGAA GCGATCTGCG ATCTGGAATA TGTTGAAGAT 
TCCGCCGCAG AAACCGACAT GAACGTCGTG ATGACTGAAG ACGGCCGCAT TATTGAAGTA 
CAGGGTACCG CGGAAGGCGA GCCGTTCAGC CATGAAGAAC TTCTCACTTT GTTGGCGCTG 
GCCCGAGGGG GAATTGAATC CATTGTGGCG ACGCAGAAGG CGGCGTTAGA AAATTGA
 
Protein sequence
MRPAGRSANQ VRPVTLTRNY TKHAEGSVLV EFGDTKVLCT ASIEEGVPRF LKGQGQGWIT 
AEYGMLPRAT HTRNAREAAK GKQGGRTMEI QRLIARALRA AVDLKTLGEF TITLDCDVIQ 
ADGGTRTASI TGACVALADA LNKLVANGKL KTNPMKGMVA AVSVGIVNGE AICDLEYVED 
SAAETDMNVV MTEDGRIIEV QGTAEGEPFS HEELLTLLAL ARGGIESIVA TQKAALEN