Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A3923 |
Symbol | waaA |
ID | 6516725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 3795424 |
End bp | 3796701 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642748896 |
Product | 3-deoxy-D-manno-octulosonic-acid transferase |
Protein accession | YP_002116659 |
Protein GI | 194736070 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0222416 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00203973 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTCGAAT TGCTTTACAC CGCTCTTCTC TACCTTATTC AGCCTCTGAT CTGGATACGG CTTTGGGTGC GTGGACGTAA AGCGCCGGCC TATCGTAAAC GCTGGGGTGA ACGCTACGGA TTCTACCGCC GTCCGTTGAA ACCGGGCGGA ATCATGCTGC ATTCCGTCTC GGTGGGCGAA ACTCTGGCGG CCATCCCATT GGTCCGCGCT CTACGTCATC GCTATCCCGA TCTGCCTATT ACCGTAACGA CCATGACGCC GACCGGCTCG GAGCGCGTCC AGTCCGCCTT TGGCAACGAT GTTCAGCACG TTTACTTGCC TTATGATTTG CCCGATGCGC TCAATCGTTT CCTCAATGAG ATTGATCCTA AGCTGGTATT GATCATGGAG ACTGAGCTCT GGCCAAATCT GATTGCTGCG CTGCACAAAC GTCATATTCC GCTGGTTATC GCTAATGCGC GGCTTTCCGC CCGCTCCGCC GCGGGTTATG CGAAGCTTGG CAAGTTTGTC CGTACGCTCC TGCGCCGTAT CACCCTGATT GCCGCGCAAA ACGAAGAAGA TGGCGAACGC TTTGTGGCAT TGGGCGCGAA GAACAATCAG GTCACGGTCA CCGGCAGTCT GAAATTTGAT ATTTCAGTTA CGCCGCAGCT GGCGGCTAAA GCCGTTACGC TACGCCGCCA GTGGGCGCCG CACCGTCCGG TCTGGATTGC CACCAGCACC CACGATGGCG AAGAGAGTAT CGTTATCGCC GCTCACCAGG CGTTATTACA TCAATTCCCG AATTTATTAC TGATTCTGGT GCCCCGCCAT CCAGAGCGTT TCCCGGATGC TATCAATCTT GTGCGTCAGG CAGGGTTAAG CTACATCACT CGCTCTTCGG GCGAAGTGCC GTCCGCCAGC ACCCAGGTCG TGGTAGGCGA TACTATGGGC GAATTAATGT TGCTCTATGG CATTGCCGAT CTCGCCTTTG TTGGTGGTTC GCTGGTTGAA CGCGGCGGTC ATAACCCGCT GGAGGCCGCC GCTCATGCGA TTCCGGTACT GATGGGTCCG CATACCTTTA ACTTTAAAGA TATTTGCGCC CGTCTGGATC AGGCGAGCGG ACTTATCACG ATTACCGATG CGGCTACGCT GGCAAAAGAA GTTTCCTCTT TACTGACCGA CGCTGATTAT CGTAATTTCT ACGGACGTCA CGCAGTTGAA GTGCTGTATC AAAATCAGGG CGCGCTCCAG CGTCTGCTGC AACTGCTGGA ACCTTATCTG CCACCGAAAA CGCATTGA
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Protein sequence | MLELLYTALL YLIQPLIWIR LWVRGRKAPA YRKRWGERYG FYRRPLKPGG IMLHSVSVGE TLAAIPLVRA LRHRYPDLPI TVTTMTPTGS ERVQSAFGND VQHVYLPYDL PDALNRFLNE IDPKLVLIME TELWPNLIAA LHKRHIPLVI ANARLSARSA AGYAKLGKFV RTLLRRITLI AAQNEEDGER FVALGAKNNQ VTVTGSLKFD ISVTPQLAAK AVTLRRQWAP HRPVWIATST HDGEESIVIA AHQALLHQFP NLLLILVPRH PERFPDAINL VRQAGLSYIT RSSGEVPSAS TQVVVGDTMG ELMLLYGIAD LAFVGGSLVE RGGHNPLEAA AHAIPVLMGP HTFNFKDICA RLDQASGLIT ITDAATLAKE VSSLLTDADY RNFYGRHAVE VLYQNQGALQ RLLQLLEPYL PPKTH
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