Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A3917 |
Symbol | |
ID | 6516317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 3788872 |
End bp | 3789885 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 642748890 |
Product | lipopolysaccharide 1,3-galactosyltransferase |
Protein accession | YP_002116653 |
Protein GI | 194737566 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1442] Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.752434 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.01081 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGAA AATATTTTGA AGAAGAAGTC ATTCAACAGA CTTTAGATTA TAACTATGCA CAACATAGTG ATGCTGATAA ATTTAATATA GCTTATGGGA TTGATAAAAA CTTTCTTTTT GGCTGTGGTG TCTCTATTGC ATCGGTTCTC CTTGCTAACC CAGAGAAGGC GTTAGCTTTC CATGTTTTTA CCGATTTCTT TGACTCTGAA GACCAGCAGC GATTTGAGGC ATTAGCAAAA CAGTACGCTA CGCAGATTGT TGTTTACCTA ATCGACTGTG AGCGCTTAAA ATCGCTACCC AGTACCAAAA ACTGGACCTA TGCAACATAC TTTAGATTCA TTATCGCCGA TTATTTTTCA GATAAAACAG ATAGAGTACT TTATCTGGAT GCTGATATTG CATGTAAGGG GAGTATTCAG GAGCTTATTG AGCTTAACTT CGCTGAAAAT GAGATTGCGG CTGTCGTTGC TGAAGGCGAG TTGGAATGGT GGACTAAGCG CTCGGTTAGC CTGGCAACGC CTGGGCTGGT TTCTGGCTAT TTTAATGCCG GTTTTATTTT AATTAACATA CCTCTTTGGA CCGCAGAAAA TATCTCTAAG AAAGCGATTG AAATGCTAAA AGATCCGGAG GTAGTACAGC GCATAACGCA CCTTGATCAG GATGTATTAA ATATATTGTT AGTGAATAAA GCACGTTTTG TTGATAAAAA ATTTAATACA CAATTTAGTC TTAACTATGA ATTAAAAGAT TCAGTTATTA ATCCAGTTGA TGCTGAGACT GTATTTGTTC ATTATATCGG ACCAACGAAG CCCTGGCATA GTTGGGGGGC TTATCCTGTG TCACAATATT TTTTACAGGC TAAGAGCAAC TCACCATGGT CTCATTGTGC ACTTTTAAAT CCAGTCACTA GTCATCAGTT ACGTTATGCG GCAAAGCATA TGTTTAATCA GAAGCATTAT ACTTCGGGTA TAAATTATTA TATAGCCTAC TTTAAACGTA AACTTCTTGA ATAA
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Protein sequence | MSRKYFEEEV IQQTLDYNYA QHSDADKFNI AYGIDKNFLF GCGVSIASVL LANPEKALAF HVFTDFFDSE DQQRFEALAK QYATQIVVYL IDCERLKSLP STKNWTYATY FRFIIADYFS DKTDRVLYLD ADIACKGSIQ ELIELNFAEN EIAAVVAEGE LEWWTKRSVS LATPGLVSGY FNAGFILINI PLWTAENISK KAIEMLKDPE VVQRITHLDQ DVLNILLVNK ARFVDKKFNT QFSLNYELKD SVINPVDAET VFVHYIGPTK PWHSWGAYPV SQYFLQAKSN SPWSHCALLN PVTSHQLRYA AKHMFNQKHY TSGINYYIAY FKRKLLE
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