Gene SeSA_A3894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3894 
Symbol 
ID6519323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp3766990 
End bp3767766 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content58% 
IMG OID642748867 
ProductDNA-binding transcriptional repressor LldR 
Protein accessionYP_002116630 
Protein GI194735151 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.659933 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGTGA TGCCAAAACG CCTGTCTGAC GAGATTGCCT CTCGCGTGCG GGCGCTGATT 
GAAGAACAAA ACCTGGAAGC GGGCATGAAA TTGCCCGCCG AGCGCCAGTT GGCTCTACAG 
CTTGGCGTAT CACGCAACTC TTTACGCGAA GCGCTGGCGA AGCTGGTCAG TGAAGGCGTG 
CTGGTGAGTC GTCGCGGCGG CGGGACATTT GTCCGCTGGC AACACGAAAC CTGGTCTGAA 
CAGAATATCG TTCAGCCGCT GAAAACCCTG CTGGCGGACG ATCCTGATTA CAGCTTCGAC 
ATTCTGGAAG CCCGCCACGC CATTGAAGCC AGTACGGCCT GGCACGCCGC CATGCGGGCC 
ACCAGCGCCG ACAAAGAGAA GATCAGACTC TGCTTTGATG CGACGCTCAG CGAAGACCCG 
GATCTCGCCT CCCAAGCCGA CGTGCGCTTT CATCTGGCGA TCGCGGAAGC CTCGCACAAT 
GTGGTGCTGT TGCAAACCAT GCGCGGTTTC TTCGACGTCC TGCAATCCTC CGTCAAACAG 
AGTCGCCAGC GTATGTATCT CGTTCCGCCC GTATTCTCAA AGCTGACGGA ACAACACCAG 
GCGGTGATGG ACGCCATTCT GGACGGTAAC GCCGACGGCG CGCGTAAAGC GATGATGGCG 
CACCTCAGTT TTGTCCACAC CACGATTAAA CGATTTGATG AAGACCAGGC CCGCCAGGCG 
CGTATTACCC GCCTGCCCGG CGACCATAAT GAGATGACCA GGGAGAATAA ATCATGA
 
Protein sequence
MIVMPKRLSD EIASRVRALI EEQNLEAGMK LPAERQLALQ LGVSRNSLRE ALAKLVSEGV 
LVSRRGGGTF VRWQHETWSE QNIVQPLKTL LADDPDYSFD ILEARHAIEA STAWHAAMRA 
TSADKEKIRL CFDATLSEDP DLASQADVRF HLAIAEASHN VVLLQTMRGF FDVLQSSVKQ 
SRQRMYLVPP VFSKLTEQHQ AVMDAILDGN ADGARKAMMA HLSFVHTTIK RFDEDQARQA 
RITRLPGDHN EMTRENKS