Gene SeSA_A3796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3796 
Symbol 
ID6516209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp3658502 
End bp3659221 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content50% 
IMG OID642748775 
ProductGntR family regulatory protein 
Protein accessionYP_002116539 
Protein GI194734191 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGC AACCCGACAG TAAAAGCGCC AAACCGCTTT ATAAGCAGCT TGAAGCCGCC 
TTAAAAGAGG CCATTGCGCG TGGAGAGTAT AAACCAGGCC AGCAGATCCC GACGGAAAAT 
GAACTGAGCG CGCGCTGGCA GGTGAGCAGG GTCACGGTCC GTAAGGCGCT GGATGCGCTG 
ACGCGTGAAA ATTTGCTGAC CCGTGTCTCC GGCAAAGGCA CCTTTGTCTC TGGTGAGAAA 
TTTCAGCGCA GCATGACCGG CATCATGAGT TTCAGCGAGT TATGCCAGTC CCAGGGACGT 
CGCCCGGGGT CACGCACCAT CAAATCCGTT TTTGAATCGG TAGACGATGA GACAAAAGCG 
TTACTGAATA TGAACGATGG CGAAAAAGCG GTCGTCATTG AACGTATCCG CTATGCCGAC 
GATGTGGCGG TATCGCTGGA AACCGTACAT CTTCCCCCAC GTTTTGCGTT TTTGCTGGAC 
GAAGATCTTA ATAATCACTC TTTGTATGAA TGCTTACGCG AGAAATACCA TTTATGGTTT 
ACCCACTCCC GTAAGATGAT CGAACTGGTT TATGCCAGCT TTGAAGTCGC CCATTATCTT 
GGCGTCAACG AGGGTTATCC GCTGATCCTG ATAAAAAGTG AAATGATTGA TAACAAAGGA 
GAACTCTCCT GCGTTTCGCA ACAGTTGATT GTCGGCGATA AAATACGGTT TACCGTATGA
 
Protein sequence
MIEQPDSKSA KPLYKQLEAA LKEAIARGEY KPGQQIPTEN ELSARWQVSR VTVRKALDAL 
TRENLLTRVS GKGTFVSGEK FQRSMTGIMS FSELCQSQGR RPGSRTIKSV FESVDDETKA 
LLNMNDGEKA VVIERIRYAD DVAVSLETVH LPPRFAFLLD EDLNNHSLYE CLREKYHLWF 
THSRKMIELV YASFEVAHYL GVNEGYPLIL IKSEMIDNKG ELSCVSQQLI VGDKIRFTV