Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A3776 |
Symbol | nikR |
ID | 6518829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 3635299 |
End bp | 3635700 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642748755 |
Product | nickel responsive regulator |
Protein accession | YP_002116519 |
Protein GI | 194734904 |
COG category | [K] Transcription |
COG ID | [COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain |
TIGRFAM ID | [TIGR02793] nickel-responsive transcriptional regulator NikR |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.472074 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACGTG TCACCATCAC CCTCGATGAC GATTTACTGG AAACGCTGGA CAGCCTGAGC CAGCGACGCG GCTATAACAA TCGCTCCGAA GCGATCCGTG ATATTTTGCG CGGCGCTCTG GCGCAGGAGG CCACCCAGGA ACACGGTACA CAGGGTTTCG CGGTACTTTC ATATGTTTAT GAACATGAGA AACGGGATTT AGCCAGCCGC ATCGTCTCCA CCCAGCATCA TCATCATGAT TTATCCGTCG CCACGCTGCA CGTCCATATC AACCACGATG ACTGTCTGGA GATCGCCGTT CTGAAGGGCG ATATGGGCGA CGTACAGCAT TTTGCCGATG ATGTTATCGC CCAGCGCGGC GTGCGCCACG GCCACTTGCA GTGTTTGCCG AAAGAAGACT AA
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Protein sequence | MQRVTITLDD DLLETLDSLS QRRGYNNRSE AIRDILRGAL AQEATQEHGT QGFAVLSYVY EHEKRDLASR IVSTQHHHHD LSVATLHVHI NHDDCLEIAV LKGDMGDVQH FADDVIAQRG VRHGHLQCLP KED
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