Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A3728 |
Symbol | glgB |
ID | 6518006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 3590015 |
End bp | 3592201 |
Gene Length | 2187 bp |
Protein Length | 728 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642748708 |
Product | glycogen branching enzyme |
Protein accession | YP_002116472 |
Protein GI | 194737044 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.636396 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCAGTC GTATCGATAG AGACGTGATT AATGCGCTAA TTGCAGGACA TTTTGCGGAC CCTTTTTCCG TACTCGGAAT GCACCAGACC CAAGCCGGAC TAGAAGTCCG CGCCCTATTA CCTGACGCCA CCGACGTATG GGTGATTGAA CCCAAAACCG GACGTAAAGT CGGCAAACTG GAATGCCTCG ACGCTCGCGG TTTTTTCTGC GGCGTTTTAC CCCGACGTAA AAATTTCTTT CGCTATCAGC TCGCCGTGAC CTGGCACGGA CAGCAGAACC TCATCGACGA TCCTTACCGT TTTGGTCCAT TAATACAGGA AATGGATGCC TGGCTATTGT CGGAAGGCAC CCACCTGCGT CCTTATGAAA CGCTGGGCGC GCACGCCGAT ACGATGGATG GCGTCACCGG CACCCGTTTC TCCGTCTGGG CGCCTAATGC TCGTCGCGTT TCGGTTGTCG GGCAATTCAA CTATTGGGAT GGGCGTCGCC ACCCGATGCG TCTGCGCAAA GAGAGCGGTA TTTGGGAGCT GTTTATCCCC GGCGCGCATA ATGGACAACT GTATAAATTC GAGCTGCTTG ATGCGAATGG TAATCTGCGC ATTAAAGCCG ATCCCTATGC TTTTGAGGCG CAGATGCGTC CGGAAACGGC GTCGATGATT TGCGGACTGC CGGAGAAAGT GACGCCAAGC GAAGAACGAC AAAAAGCCAA TCAGTTTGAT GCGCCGATCT CGATTTATGA GGTGCATTTA GGTTCATGGC GCCGCCATAC GGATAACAAT TTCTGGCTGA GCTATCGTGA GCTGGCGGAT CAGCTTGTGC CTTACGCCAA ATGGATGGGC TTTACGCACC TTGAACTCTT GCCGGTCAAC GAACATCCGT TTGACGGCAG TTGGGGCTAC CAGCCGACCG GCCTCTACGC GCCGACCCGC CGCTTTGGTA CGCGGGACGA CTTCCGCTAT TTCATCAATG CGGCCCATGC GGCGGGCCTT AACGTCATTC TCGACTGGGT GCCGGGCCAT TTCCCGTCCG ATGAATTTAG CCTCGCGGAG TTTGACGGCA CCCACCTCTA TGAGCACAGC GACCCGCGCG AGGGCTATCA CCAGGACTGG AATACGCTGA TCTACAACTA TGGTCGTCGT GAAGTCAGTA ATTATCTGGT GGGTAACGCC CTGTACTGGA TGGAGCGTTT TGGGATTGAT GCGCTGCGTG TCGATGCGGT GGCCTCTATG ATCTACCGCG ACTACAGCCG CAAAGAGGGC GAGTGGATAC CGAACGAGTT CGGCGGTCGT GAAAACCTGG AAGCCATTGA GTTTCTGCGT AATACCAACC GCATTATTGG CGAGCAGGTG CCCGGCGCGG TCAGCATGGC GGAAGAGTCG ACAGACTTCT CTGGCGTGAC GCGTCCACCG GAAACGGGCG GCCTGGGGTT CTGGTACAAG TGGAACCTGG GCTGGATGCA CGACACGCTG GACTATATGA AGCTGGACCC AGTGTACCGC CAGTATCATC ACGACAAGCT GACCTTTGGT ATGTTGTACA ACCATACCGA AAACTTTGTT CTGCCGCTGT CGCACGATGA GGTGGTTCAC GGCAAGAAAT CCATTCTCGA TCGTATGCCG GGCGATGCGT GGCAAAAATT CGCCAACCTG CGCGCCTACT ATGGCTGGAT GTGGGCCTTC CCCGGCAAGA AACTGCTGTT TATGGGGAAT GAGTTTGCCC AGGGACGCGA GTGGAACCAT GACGCCAGCC TCGACTGGCA CTTGCTGGAG GGGGGCGATA ACTGGCACCA CGGGGTTCAG CGTCTGGTAC GCGATCTCAA CCACACCTAT CGCCACCATA AAGCGTTGCA TGAGCTGGAT TTTGATGCTT ACGGCTTTGA GTGGCTGGTG GTCGATGACA ATGAACGCTC GGTACTGATT TTTGTACGCC GTGATAAAGC CGGTAACGAG ATCATCATCG CCAGCAACTT TACGCCCGTT CCTCGCCACG ACTACCGTTT TGGCATCAAC CAGCCGGGAC GCTGGCGTGA AATTCTCAAT ACTGATTCGA TGCATTATCA CGGTAGCAAC ACCGGCAACG GCGGCGTGGT GCACAGCGAT GAGATCGAAA GCCATGGCCG TCAGCACTCT CTTAGCCTGA CGTTACCGCC GTTGGCGACG ATCTGGCTGA TGCGGGAGGG GGAATGA
|
Protein sequence | MSSRIDRDVI NALIAGHFAD PFSVLGMHQT QAGLEVRALL PDATDVWVIE PKTGRKVGKL ECLDARGFFC GVLPRRKNFF RYQLAVTWHG QQNLIDDPYR FGPLIQEMDA WLLSEGTHLR PYETLGAHAD TMDGVTGTRF SVWAPNARRV SVVGQFNYWD GRRHPMRLRK ESGIWELFIP GAHNGQLYKF ELLDANGNLR IKADPYAFEA QMRPETASMI CGLPEKVTPS EERQKANQFD APISIYEVHL GSWRRHTDNN FWLSYRELAD QLVPYAKWMG FTHLELLPVN EHPFDGSWGY QPTGLYAPTR RFGTRDDFRY FINAAHAAGL NVILDWVPGH FPSDEFSLAE FDGTHLYEHS DPREGYHQDW NTLIYNYGRR EVSNYLVGNA LYWMERFGID ALRVDAVASM IYRDYSRKEG EWIPNEFGGR ENLEAIEFLR NTNRIIGEQV PGAVSMAEES TDFSGVTRPP ETGGLGFWYK WNLGWMHDTL DYMKLDPVYR QYHHDKLTFG MLYNHTENFV LPLSHDEVVH GKKSILDRMP GDAWQKFANL RAYYGWMWAF PGKKLLFMGN EFAQGREWNH DASLDWHLLE GGDNWHHGVQ RLVRDLNHTY RHHKALHELD FDAYGFEWLV VDDNERSVLI FVRRDKAGNE IIIASNFTPV PRHDYRFGIN QPGRWREILN TDSMHYHGSN TGNGGVVHSD EIESHGRQHS LSLTLPPLAT IWLMREGE
|
| |