Gene SeSA_A3716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3716 
Symbol 
ID6519221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp3577535 
End bp3578365 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content54% 
IMG OID642748696 
Productintramembrane serine protease GlpG 
Protein accessionYP_002116460 
Protein GI194738360 
COG category[R] General function prediction only 
COG ID[COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGATGA TTACTTCCTT TGCGAATCCT CGCGTGGCGC AGGCATTTGT TGATTACATG 
GCCACCCAGG GCGTCATTCT TACTATTCAG CAACATAATC AAAGCGATAT CTGGTTGGCG
GATGAATCGC AGGCCGAACG TGTGCGGGTC GAGCTGGCGC GGTTTATAGA AAATCCCGGC
GATCCGCGTT ATCTGGCGGC TAGCTGGCAG TCCGGGCAGA CGAACAGCGG GCTACGCTAC
CGCCGTTTTC CCTTTCTCGC CACGCTGCGT GAACGAGCCG GCCCTGTTAC CTGGATCGTG
ATGCTCGCCT GCGTGCTGGT CTATATCGCG ATGAGTCTCA TCGGCGATCA GACGGTGATG
GTGTGGCTGG CGTGGCCGTT CGATCCGGTT TTAAAATTTG AAGTCTGGCG CTACTTCACC
CATATCTTTA TGCACTTCTC ACTGATGCAT ATTCTTTTTA ACCTGCTGTG GTGGTGGTAT
CTAGGCGGGG CGGTAGAGAA GCGCCTGGGC AGCGGTAAAT TAATCGTCAT TACGGTGATA
AGCGCGCTAC TAAGCGGCTA TGTACAGCAG AAATTTAGCG GCCCGTGGTT TGGCGGGCTG
TCTGGCGTCG TCTATGCGCT GATGGGTTAC GTGTGGCTGC GCGGAGAGCG CGATCCGCAA
AGCGGAATTT ACCTCCAGCG CGGCTTAATT ATTTTTGCAT TATTGTGGAT AGTCGCTGGT
TGGTTTGACT GGTTTGGCAT GTCTATGGCG AACGGCGCGC ACATCGCCGG GCTTATCGTC
GGTTTAGCGA TGGCCTTTGT TGATACGCTG AATGCGCGAA AACGAACGTG A
 
Protein sequence
MLMITSFANP RVAQAFVDYM ATQGVILTIQ QHNQSDIWLA DESQAERVRV ELARFIENPG 
DPRYLAASWQ SGQTNSGLRY RRFPFLATLR ERAGPVTWIV MLACVLVYIA MSLIGDQTVM
VWLAWPFDPV LKFEVWRYFT HIFMHFSLMH ILFNLLWWWY LGGAVEKRLG SGKLIVITVI
SALLSGYVQQ KFSGPWFGGL SGVVYALMGY VWLRGERDPQ SGIYLQRGLI IFALLWIVAG
WFDWFGMSMA NGAHIAGLIV GLAMAFVDTL NARKRT