Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A3671 |
Symbol | nirB |
ID | 6517152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 3521344 |
End bp | 3523887 |
Gene Length | 2544 bp |
Protein Length | 847 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642748654 |
Product | nitrite reductase [NAD(P)H], large subunit |
Protein accession | YP_002116418 |
Protein GI | 194736602 |
COG category | [C] Energy production and conversion |
COG ID | [COG1251] NAD(P)H-nitrite reductase |
TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAG TCAGACTCGC TATTATCGGT AATGGTATGG TCGGCCACCG CTTTATTGAG GATCTCCTTG ATAAATCCGA CGCTAGCCTG TTCGACATTA CCGTGTTCTG TGAAGAACCC CGTAAAGCCT ATGACCGTGT CCACTTATCA TCCTACTTCT CTCACCACAC CGCGGAAGAG CTCTCTCTGG TGCGTGAAGG ATTTTACGAG AAGCACGGCG TGAAGGTACT GGTTGGCGAA CGCGCAATTA CCATTAACCG TCAGGAGAAA GTGATTCACT CCAGCGCGGG TCGTACCGTT TATTATGACA AGCTGATCAT GGCGACCGGT TCATATCCGT GGATTCCGCC GATTAAAGGC TCCGAAACCC AGGATTGCTT CGTTTACCGT ACCATTGAAG ACCTCAACGC TATCGAAGCC TGCGCCCGTC GCAGCAAGCG CGGGGCGGTG GTCGGCGGCG GTCTGCTGGG GCTGGAAGCC GCTGGCGCGC TGAAAAACCT CGGAGTGGAA ACGCACGTCA TTGAATTTGC GCCAATGCTG ATGGCGGAAC AGCTCGATCA GATGGGCGGC GAGCAGCTAC GTCGCAAGAT CGAAAGCATG GGCGTGCGTG TACACACCAG TAAAAACACG CAAGAGATTG TTCAGCAGGG TAACGAAGCG CGTAAGACTA TGCGTTTTGC CGACGGCAGC GAGCTGGAAG TCGATTTTAT CGTCTTCTCT ACCGGTATTC GCCCACGCGA CAAGCTGGCT ACCCAGTGCG GTCTGGCCGT CGCGCAGCGC GGCGGGATCG TGATTAACGA CACCTGCCAG ACGTCCGACC CGGATATCTA CGCTATCGGC GAGTGCGCCA GTTGGAACAA CCGCGTTTAC GGTCTGGTAG CACCGGGCTA TAAAATGGCC CAGGTCGCCG TTGACCATAT CCTCGGCAGT GAAAACGCCT TTGAAGGGGC GGATCTCAGC GCCAAGCTGA AGCTGCTGGG CGTGGACGTC GGCGGCATCG GCGACGCGCA TGGCCGCACG CCGGGCGCGC GTAGCTACGT TTACCTCGAT GAAAGCAAAG AAGTCTACAA ACGTCTTATT GTCAGCGAAG ATAACAAAAC GCTGCTCGGC GCAGTACTGG TCGGCGACAC CAGCGATTAC GGCAATTTGC TGCAACTGGT ACTGAACGCC ATCGAACTGC CGGAAAACCC GGATTCGCTG ATCCTGCCGT CGCACGCGGG CAGTGGTAAA CCCTCTATCG GCGTGGATAA ACTGCCGGAC AGCGCGCAGA TCTGCTCCTG CTTCGATGTG ACTAAAGGCG ATCTGATCGC CGCTATCAAT AAAGGCTGTC ATACCGTGGC GGCGCTGAAA GCGGAAACCA AAGCCGGAAC CGGCTGCGGC GGCTGCATCC CGCTGGTGAC GCAGGTACTG AACACCGAAC TGGCGAAACA GGGTATTGAA GTCAACAACA ACCTGTGCGA GCACTTTGCT TATTCTCGTC AGGAACTGTT CCACTTAATA CGCGTGGAAG GCATTAAAAC CTTTGAAGAA CTGCTGGCGA AACACGGTAA AGGCTACGGC TGCGAAGTGT GTAAGCCGAC CGTCGGTTCG CTGCTGGCGT CGTGCTGGAA CGAATACATC CTCAAACCGC AGCACACGCC GCTACAGGAT ACTAACGATA ACTTCCTGGC GAATATCCAG AAAGACGGCA CCTACTCGGT GATCCCGCGC TCCGCTGGCG GTGAAATCAC CCCGGAAGGT CTGGTGGCCG TGGGTCGTAT CGCCCGCGAG TTTAACCTCT ATACCAAAAT TACCGGTTCT CAGCGTATCG GTCTGTTTGG CGCGCAAAAA GACGATCTGC CGGAAATCTG GCGTCAACTG ATTGAAGCGG GCTTCGAAAC CGGTCACGCG TACGCCAAAG CGCTGCGGAT GGCGAAAACC TGCGTCGGCA GCACCTGGTG CCGCTACGGC GTGGGCGACA GCGTCGGTTT CGGCGTGGAG CTGGAAAACC GCTACAAAGG CATTCGCACC CCGCACAAGA TGAAGTTCGG CGTCTCCGGC TGTACCCGTG AATGTGCGGA AGCGCAGGGT AAAGATGTGG GTATCATCGC CACTGAGAAA GGCTGGAACC TGTACGTTTG CGGTAACGGC GGCATGAAAC CTCGTCATGC GGATCTGCTG GCAGCCGATC TCGATCGCGA CACGCTGCTC AAGTATCTCG ACCGCTTTAT GATGTTCTAC ATCCGTACCG CCGACAAACT GACCCGTACC GCACCGTGGT TAGACAACCT GGAAGGCGGC ATCGACTATC TGAAATCGGT CATCATCGAC GACAAGCTGG GCCTGAACGA ACATCTGGAA GAAGAGATGG CGCGCCTGCG CGCAGCGGTG GTCTGCGAGT GGACGGAGAC CGTCAACACG CCAGCGGCGC AGGTTCGTTT CAAACACTTT ATCAACAGCG ACAAGCGCGA CCCAAATGTT CAGGTTGTGC CGGAACGCGA ACAGCATCGT CCGGCCACGC CGTATGAACG TATCCCGGTC ACTCTGGTGG AGGAAAACGC ATGA
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Protein sequence | MSKVRLAIIG NGMVGHRFIE DLLDKSDASL FDITVFCEEP RKAYDRVHLS SYFSHHTAEE LSLVREGFYE KHGVKVLVGE RAITINRQEK VIHSSAGRTV YYDKLIMATG SYPWIPPIKG SETQDCFVYR TIEDLNAIEA CARRSKRGAV VGGGLLGLEA AGALKNLGVE THVIEFAPML MAEQLDQMGG EQLRRKIESM GVRVHTSKNT QEIVQQGNEA RKTMRFADGS ELEVDFIVFS TGIRPRDKLA TQCGLAVAQR GGIVINDTCQ TSDPDIYAIG ECASWNNRVY GLVAPGYKMA QVAVDHILGS ENAFEGADLS AKLKLLGVDV GGIGDAHGRT PGARSYVYLD ESKEVYKRLI VSEDNKTLLG AVLVGDTSDY GNLLQLVLNA IELPENPDSL ILPSHAGSGK PSIGVDKLPD SAQICSCFDV TKGDLIAAIN KGCHTVAALK AETKAGTGCG GCIPLVTQVL NTELAKQGIE VNNNLCEHFA YSRQELFHLI RVEGIKTFEE LLAKHGKGYG CEVCKPTVGS LLASCWNEYI LKPQHTPLQD TNDNFLANIQ KDGTYSVIPR SAGGEITPEG LVAVGRIARE FNLYTKITGS QRIGLFGAQK DDLPEIWRQL IEAGFETGHA YAKALRMAKT CVGSTWCRYG VGDSVGFGVE LENRYKGIRT PHKMKFGVSG CTRECAEAQG KDVGIIATEK GWNLYVCGNG GMKPRHADLL AADLDRDTLL KYLDRFMMFY IRTADKLTRT APWLDNLEGG IDYLKSVIID DKLGLNEHLE EEMARLRAAV VCEWTETVNT PAAQVRFKHF INSDKRDPNV QVVPEREQHR PATPYERIPV TLVEENA
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