Gene SeSA_A3635 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3635 
SymbolrplD 
ID6515252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp3492854 
End bp3493459 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content53% 
IMG OID642748617 
Product50S ribosomal protein L4 
Protein accessionYP_002116381 
Protein GI194736512 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.00226471 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.236826 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTAG TATTGAAAGA CGCGCAGAGC GCGCTGACTG TTTCCGAAAC TACCTTCGGT 
CGTGATTTCA ACGAAGCGCT GGTTCACCAG GTTGTTGTTG CTTATGCAGC TGGTGCTCGT 
CAGGGTACTC GTGCTCAGAA GACTCGTGCT GAAGTAACTG GTTCCGGTAA AAAACCGTGG 
CGCCAGAAAG GCACTGGCCG TGCGCGTTCA GGTTCTATCA AGAGCCCGAT CTGGCGTTCC 
GGTGGCGTGA CCTTCGCTGC TCGTCCGCAG GACCACAGTC AAAAAGTTAA CAAGAAGATG 
TACCGCGGCG CGCTGAAAAG CATCCTGTCC GAACTGGTAC GTCAGGATCG TCTGATCGTT 
GTCGAGAAGT TCTCTGTAGA AGCGCCGAAA ACTAAGCTGC TGGCACAGAA ACTGAAAGAC 
ATGGCTCTGG AAGATGTGCT GATCATCACC GGTGAGCTGG ACGAAAACCT GTTCCTGGCC 
GCACGTAACC TGCACAAGGT TGACGTACGC GATGCGACTG GTATCGACCC GGTTAGCCTG 
ATCGCCTTCG ACAAAGTCGT AATGACTGCT GATGCTGTTA AGCAAGTTGA GGAGATGCTG 
GCATGA
 
Protein sequence
MELVLKDAQS ALTVSETTFG RDFNEALVHQ VVVAYAAGAR QGTRAQKTRA EVTGSGKKPW 
RQKGTGRARS GSIKSPIWRS GGVTFAARPQ DHSQKVNKKM YRGALKSILS ELVRQDRLIV 
VEKFSVEAPK TKLLAQKLKD MALEDVLIIT GELDENLFLA ARNLHKVDVR DATGIDPVSL 
IAFDKVVMTA DAVKQVEEML A