| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A3621 |
|---|
| Symbol | rplF |
|---|
| ID | 6517657 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | - |
|---|
| Start bp | 3486782 |
|---|
| End bp | 3487315 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642748603 |
|---|
| Product | 50S ribosomal protein L6 |
|---|
| Protein accession | YP_002116367 |
|---|
| Protein GI | 194735909 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0097] Ribosomal protein L6P/L9E |
|---|
| TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0403056 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCGTG TTGCTAAAGC ACCGGTCGTT GTTCCTGCCG GCGTTGATGT CAAAATCAAC
GGTCAGGTTA TTACGATCAA AGGTAAAAAC GGCGAGCTGA CTCGTACTCT CAACGATGCT
GTTGAAGTTA AACATGCAGA TAATGCACTG ACCTTCGGTC CGCGTGATGG TTACGCAGAC
GGTTGGGCAC AGGCTGGTAC CGCGCGTGCC CTGCTGAACT CAATGGTTAT CGGTGTTACC
GAAGGCTTCA CTAAGAAGCT GCAGCTGGTT GGTGTAGGTT ATCGTGCAGC GGTTAAAGGG
AATGTAGTAA ACCTGTCTTT AGGTTTCTCT CACCCGGTTG ACCATCAGCT GCCGGCAGGT
ATCACTGCTG AATGTCCGAC TCAAACTGAA ATCGTGCTGA AAGGCGCTGA TAAGCAGGTG
ATCGGCCAGG TTGCAGCAGA TCTGCGCGCC TACCGTCGTC CTGAGCCTTA CAAAGGCAAG
GGTGTTCGTT ACGCCGACGA AGTCGTGCGT ACCAAAGAGG CTAAGAAGAA GTAA
|
|---|
| Protein sequence | MSRVAKAPVV VPAGVDVKIN GQVITIKGKN GELTRTLNDA VEVKHADNAL TFGPRDGYAD
GWAQAGTARA LLNSMVIGVT EGFTKKLQLV GVGYRAAVKG NVVNLSLGFS HPVDHQLPAG
ITAECPTQTE IVLKGADKQV IGQVAADLRA YRRPEPYKGK GVRYADEVVR TKEAKKK
|
|---|
| |