Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A3616 |
Symbol | secY |
ID | 6519881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 3483941 |
End bp | 3485272 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642748598 |
Product | preprotein translocase subunit SecY |
Protein accession | YP_002116362 |
Protein GI | 194734497 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00028758 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAAAC AACCGGGATT AGATTTTCAA AGTGCCAAAG GTGGCTTAGG TGAGCTGAAA CGCAGACTGC TGTTTGTTAT CGGCGCGCTG ATTGTGTTCC GTATTGGCTC TTTTATTCCG ATCCCTGGTA TTGATGCCGC TGTACTTGCC AAACTGCTTG AGCAACAGCG AGGCACCATC ATTGAAATGT TTAACATGTT CTCTGGTGGT GCTCTCAGCC GTGCTTCTAT CTTTGCCCTG GGGATCATGC CGTATATTTC GGCGTCGATC ATTATCCAGC TGTTGACGGT GGTTCATCCA ACGCTGGCAG AAATTAAGAA AGAAGGGGAG TCTGGTCGTC GTAAGATCAG CCAGTACACC CGTTACGGTA CTCTGGTGCT GGCGATATTC CAGTCGATCG GTATTGCTAC CGGTTTGCCG AATATGCCTG GTATGCAGGG CCTGGTGATG AATCCAGGCT TTGCATTCTA TTTCACCGCT GTTGTAAGTC TGGTTACAGG AACCATGTTC CTGATGTGGC TCGGCGAACA GATTACTGAG CGCGGTATCG GTAACGGTAT CTCAATCATC ATCTTCGCTG GTATCGTTGC GGGACTCCCG CCAGCCATTG CCCATACTAT CGAGCAAGCG CGTCAAGGCG ACCTGCACTT CCTCGTGTTG CTGTTGGTTG CAGTATTAGT ATTTGCAGTG ACGTTCTTTG TAGTATTCGT TGAACGTGGT CAACGCCGTA TTGTGGTAAA CTACGCCAAA CGTCAGCAAG GTCGTCGTGT CTATGCTGCA CAGAGCACAC ATTTACCGCT GAAAGTGAAT ATGGCGGGGG TAATCCCGGC AATCTTCGCT TCCAGTATTA TTCTGTTCCC GGCGACCATC GCGTCATGGT TCGGGGGCGG TACTGGTTGG AACTGGCTGA CAACAATTTC GCTGTATTTG CAGCCTGGGC AACCGCTTTA TGTGTTACTC TATGCGTCTG CAATCATCTT CTTCTGTTTC TTCTACACGG CGTTGGTTTT CAACCCGCGT GAAACAGCAG ATAACCTGAA GAAGTCCGGT GCATTTGTAC CAGGAATTCG TCCGGGAGAG CAAACGGCGA AGTATATCGA TAAAGTAATG ACCCGCCTGA CCCTGGTTGG TGCGCTGTAT ATTACCTTTA TCTGCCTGAT CCCGGAGTTC ATGCGTGATG CAATGAAAGT GCCGTTCTAC TTCGGTGGGA CCTCACTGCT TATCGTTGTT GTCGTGATTA TGGACTTTAT GGCTCAAGTG CAAACTCTGA TGATGTCCAG TCAGTATGAG TCTGCATTGA AGAAGGCGAA CCTGAAAGGC TACGGCCGTT AA
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Protein sequence | MAKQPGLDFQ SAKGGLGELK RRLLFVIGAL IVFRIGSFIP IPGIDAAVLA KLLEQQRGTI IEMFNMFSGG ALSRASIFAL GIMPYISASI IIQLLTVVHP TLAEIKKEGE SGRRKISQYT RYGTLVLAIF QSIGIATGLP NMPGMQGLVM NPGFAFYFTA VVSLVTGTMF LMWLGEQITE RGIGNGISII IFAGIVAGLP PAIAHTIEQA RQGDLHFLVL LLVAVLVFAV TFFVVFVERG QRRIVVNYAK RQQGRRVYAA QSTHLPLKVN MAGVIPAIFA SSIILFPATI ASWFGGGTGW NWLTTISLYL QPGQPLYVLL YASAIIFFCF FYTALVFNPR ETADNLKKSG AFVPGIRPGE QTAKYIDKVM TRLTLVGALY ITFICLIPEF MRDAMKVPFY FGGTSLLIVV VVIMDFMAQV QTLMMSSQYE SALKKANLKG YGR
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