Gene SeSA_A3616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3616 
SymbolsecY 
ID6519881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp3483941 
End bp3485272 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content50% 
IMG OID642748598 
Productpreprotein translocase subunit SecY 
Protein accessionYP_002116362 
Protein GI194734497 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0201] Preprotein translocase subunit SecY 
TIGRFAM ID[TIGR00967] preprotein translocase, SecY subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00028758 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAAC AACCGGGATT AGATTTTCAA AGTGCCAAAG GTGGCTTAGG TGAGCTGAAA 
CGCAGACTGC TGTTTGTTAT CGGCGCGCTG ATTGTGTTCC GTATTGGCTC TTTTATTCCG
ATCCCTGGTA TTGATGCCGC TGTACTTGCC AAACTGCTTG AGCAACAGCG AGGCACCATC
ATTGAAATGT TTAACATGTT CTCTGGTGGT GCTCTCAGCC GTGCTTCTAT CTTTGCCCTG
GGGATCATGC CGTATATTTC GGCGTCGATC ATTATCCAGC TGTTGACGGT GGTTCATCCA
ACGCTGGCAG AAATTAAGAA AGAAGGGGAG TCTGGTCGTC GTAAGATCAG CCAGTACACC
CGTTACGGTA CTCTGGTGCT GGCGATATTC CAGTCGATCG GTATTGCTAC CGGTTTGCCG
AATATGCCTG GTATGCAGGG CCTGGTGATG AATCCAGGCT TTGCATTCTA TTTCACCGCT
GTTGTAAGTC TGGTTACAGG AACCATGTTC CTGATGTGGC TCGGCGAACA GATTACTGAG
CGCGGTATCG GTAACGGTAT CTCAATCATC ATCTTCGCTG GTATCGTTGC GGGACTCCCG
CCAGCCATTG CCCATACTAT CGAGCAAGCG CGTCAAGGCG ACCTGCACTT CCTCGTGTTG
CTGTTGGTTG CAGTATTAGT ATTTGCAGTG ACGTTCTTTG TAGTATTCGT TGAACGTGGT
CAACGCCGTA TTGTGGTAAA CTACGCCAAA CGTCAGCAAG GTCGTCGTGT CTATGCTGCA
CAGAGCACAC ATTTACCGCT GAAAGTGAAT ATGGCGGGGG TAATCCCGGC AATCTTCGCT
TCCAGTATTA TTCTGTTCCC GGCGACCATC GCGTCATGGT TCGGGGGCGG TACTGGTTGG
AACTGGCTGA CAACAATTTC GCTGTATTTG CAGCCTGGGC AACCGCTTTA TGTGTTACTC
TATGCGTCTG CAATCATCTT CTTCTGTTTC TTCTACACGG CGTTGGTTTT CAACCCGCGT
GAAACAGCAG ATAACCTGAA GAAGTCCGGT GCATTTGTAC CAGGAATTCG TCCGGGAGAG
CAAACGGCGA AGTATATCGA TAAAGTAATG ACCCGCCTGA CCCTGGTTGG TGCGCTGTAT
ATTACCTTTA TCTGCCTGAT CCCGGAGTTC ATGCGTGATG CAATGAAAGT GCCGTTCTAC
TTCGGTGGGA CCTCACTGCT TATCGTTGTT GTCGTGATTA TGGACTTTAT GGCTCAAGTG
CAAACTCTGA TGATGTCCAG TCAGTATGAG TCTGCATTGA AGAAGGCGAA CCTGAAAGGC
TACGGCCGTT AA
 
Protein sequence
MAKQPGLDFQ SAKGGLGELK RRLLFVIGAL IVFRIGSFIP IPGIDAAVLA KLLEQQRGTI 
IEMFNMFSGG ALSRASIFAL GIMPYISASI IIQLLTVVHP TLAEIKKEGE SGRRKISQYT
RYGTLVLAIF QSIGIATGLP NMPGMQGLVM NPGFAFYFTA VVSLVTGTMF LMWLGEQITE
RGIGNGISII IFAGIVAGLP PAIAHTIEQA RQGDLHFLVL LLVAVLVFAV TFFVVFVERG
QRRIVVNYAK RQQGRRVYAA QSTHLPLKVN MAGVIPAIFA SSIILFPATI ASWFGGGTGW
NWLTTISLYL QPGQPLYVLL YASAIIFFCF FYTALVFNPR ETADNLKKSG AFVPGIRPGE
QTAKYIDKVM TRLTLVGALY ITFICLIPEF MRDAMKVPFY FGGTSLLIVV VVIMDFMAQV
QTLMMSSQYE SALKKANLKG YGR