| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A3600 |
|---|
| Symbol | |
|---|
| ID | 6516113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | - |
|---|
| Start bp | 3472580 |
|---|
| End bp | 3473122 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642748583 |
|---|
| Product | topoisomerase DNA-binding C4 zinc finger domain protein |
|---|
| Protein accession | YP_002116347 |
|---|
| Protein GI | 194736535 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0551] Zn-finger domain associated with topoisomerase type I |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0707644 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.764114 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAT CAGCACTGTT TTCGGTGCGT AAAAATGAGC CCTGCCCGCA GTGCGGGGCC
GAACTGGTCA TTCGTTCCGG GAAACATGGT CCGTTTCTCG GCTGTTCTCG CTATCCAGAA
TGCGATTACG TTCGTCCGCT GAAAAGTCAG GCGGACGGAC ATATCGTTAA AATTCTGGAG
GGGCAACCGT GCCCTGAGTG TGGCGCCGTG CTGGTGCTGC GTCAGGGGCG CTTTGGCATG
TTCATCGGAT GCAGTCAGTA TCCGCAATGT GAACATACAG TGGTTATTGA TAAACCGGAT
GAAACGGCGA TTGCCTGTCC AGCCTGCCAG CAAGGACATT TGGTCCAGCG CCGTTCTCGT
TACGGTAAAA TCTTTCATTC CTGCGATCGC TACCCGGAAT GTCAGTTCGT CATTAACTTC
ACACCGGTTG CGGGGGAATG CCCCGAGTGC CATTATCCGC TACTCATCGA AAAGAAAACC
GCGCAGGGCG TGAAGCGCTT TTGCGCCAGT AAACAATGTG GAAAGCCGGT TCCGGTGGAA
TAA
|
|---|
| Protein sequence | MAKSALFSVR KNEPCPQCGA ELVIRSGKHG PFLGCSRYPE CDYVRPLKSQ ADGHIVKILE
GQPCPECGAV LVLRQGRFGM FIGCSQYPQC EHTVVIDKPD ETAIACPACQ QGHLVQRRSR
YGKIFHSCDR YPECQFVINF TPVAGECPEC HYPLLIEKKT AQGVKRFCAS KQCGKPVPVE
|
|---|
| |