Gene SeSA_A3549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3549 
Symbol 
ID6517288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp3423476 
End bp3424141 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content50% 
IMG OID642748535 
Producttranscriptional regulator 
Protein accessionYP_002116305 
Protein GI194735192 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGAAGC CTAAATTAGG GAAGATTAAG CTTCTTTCAG CGAAAGAACA GGTCGCGGCG 
GTGCTGCGTA AAGCGATTCT TTCGAGGGAG TTAGTGGAAG GGCAGGAGAT TACGTTAGAA 
GGCATTGCCG GAATGGTCGG CGTGTCCAGT ATGCCAGTGC GCGAGGCGTT TCAGATTCTG 
GCGGCGGATG GGCTGATAAA AGTGCGCCCT AATAAAGGGG CGGTGGTGTT GGGCATCAAT 
GAACAAACGA TCCGTGAACA CTATGAAATT CGCGCGCTGT TAGAAAGTGA GGCGGTGGCT 
AAAGCTTCTC GTCCCGGCAC CGATATCTCG CGGATAGCCC AGGTGCATTA TGCCGCTGAA 
AAGGCTCTCG CGGAAAATAA CTCGGCGGAA TACTCCGACC TGAATCAGGC ATTTCATATG 
GAAATCTGGA ATGTTGCTGG CAACGAAAAA ATGAAAATGT TGCTCTGTAA TATGTGGAAC 
GGCCTTTCGA TGGGCCATAA GGTCACCGAA GAAGAGTATG CCGTGATTTC CATTCAGGAA 
CATAAAAGTA TTCTGCAAGC TCTTGAACTT CATGATGAAA CATTGGCACG CCAGCGCATG 
CGCGAACACA TTATTCGCTC GATGGAGAAT ATGCTGACCC GCTATGTTGG TGACCCTTCT 
GCCTGA
 
Protein sequence
MQKPKLGKIK LLSAKEQVAA VLRKAILSRE LVEGQEITLE GIAGMVGVSS MPVREAFQIL 
AADGLIKVRP NKGAVVLGIN EQTIREHYEI RALLESEAVA KASRPGTDIS RIAQVHYAAE 
KALAENNSAE YSDLNQAFHM EIWNVAGNEK MKMLLCNMWN GLSMGHKVTE EEYAVISIQE 
HKSILQALEL HDETLARQRM REHIIRSMEN MLTRYVGDPS A