Gene SeSA_A3289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3289 
SymbolspeC 
ID6519086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp3172767 
End bp3174902 
Gene Length2136 bp 
Protein Length711 aa 
Translation table11 
GC content54% 
IMG OID642748289 
Productornithine decarboxylase 
Protein accessionYP_002116063 
Protein GI194737380 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1982] Arginine/lysine/ornithine decarboxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00321092 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAATCAA TGAATATTGC CGCCAGCGGT GAACTCATCC CCCGTCTCTC CACCCACCGA 
AACGTAGTGG CGCTGGACAG TACCGACTTT ACCGATGTGG CCGCAGTCGT CATTACCACT
GCCGACAGCC GTAGCGGTAT TCTGGCGTTG CTTAAACGCA CCGGTTTTCA CCTGCCGGTG
TTTATGCTTG TGGATGAACC CGTCAGCGCG CCTGCCGGCG TTACGGCGGT AATAGGTGGG
AACGCGCAGG AATGGCTGGA GCTGGAAAAC GCAGCCTGTC GCTACGAAGC GGAACTTCTG
CCGCCCTTTT ATGGCACCCT GACCCAGTAT GTCGACATGG GGAATAGTAC CTTTGCTTGC
CCGGGGCACC AGCATGGCGA GTTTTTTAGA AAACATCCCG CAGGCCGTCA TTTTTATGAC
TTTTTTGGTG AAAATCTGTT TCGTGCGGAT ATGTGTAACG CCGATGTGAA ACTTGGCGAT
CTGCTCATAC ATGAAGGTTC TGCCAAACAC GCGCAGAAAT TTGCGGCAAA AGTGTTTAAT
GCGGATAAAA CCTACTTTGT GCTGAATGGG ACTTCGGCGG CGAATAAAGT GGTCACTAAC
GCCCTGCTGA CGCGCGGCGA TCTGGTGCTG TTTGATCGTA ATAATCACAA ATCCAACCAC
CACGGCGCCC TGATTCAGGC CGGGGCGACG CCAGTCTATC TTGAAGCAGC GCGTAACCCG
TTTGGTTTTA TCGGTGGTAT TGATGCGCAC TGTTTTGATG AAACGTACCT GCGCGACCAG
ATTCGTGACG TGATGCCGGA AAGCGCCGAT GCATCGCGTC CGTTCCGCCT GGCGATCATT
CAGCTGGGTA CCTATGACGG CACTATTTAC AACGCCCGTC AGGTGGTGGA TAAAATCGGG
CATCTCTGCG ATTACATTCT GTTTGACTCC GCGTGGGTAG GCTATGAGCA GTTTATCAAT
ATGATGGCGG ATACCTCGCC GTTGCGGCTG GAGCTTAATG AAAACGACCC TGGGATCTTT
GTGACCCAAT CGGTACATAA GCAACAGGCG GGGTTCTCAC AAACCTCGCA GATCCACAAA
AAAGATAACC ATATTCGCGG CCAGGCGCGT TTTTGCCCGC ACAAACGCCT GAACAACGCC
TTCATGTTGC ACGCCTCGAC CAGTCCGTTC TACCCGCTGT TTGCGGCGCT GGATATCAAT
GCCAAAATCC ACGAAGGGGA GAGCGGTCGC CGCCTGTGGG CGGAGTGCGT TGCGCTGGGC
ATTGACGCGC GTAAAGCCAT TCTCGCCCGT TGCAAACTGC TTCAGCCCTT TATCCCACTG
GTGGTTGACG GCAAGCCGTG GCAGGCATAT CCGACGGAGA CCATTGCCAG CAATCGTCGT
TTCTTCAGTT TTGAGCCCGG GGCGAAATGG CATGGCTTTG AGGGTTATGC GGATGACCAG
TATTTTGTCG ACCCCTGTAA ACTGTTACTG ACCACGCCAG GTATTGATGC CGATAGTGGG
CAGTACACCG AATTCGGCAT CCCGGCGACC ATTCTCGCCC ACTATCTGCG TGAGAACGGT
ATTGTGCCTG AGAAGTGCGA TCTCAACTCG ATTCTGTTCT TGCTGACACC CGCTGAGAGC
GAAGAGAAAC TGGCGCGGCT GGTCGCGATG CTGGCGCAAT TTGAACGGCA CATTGAAGAC
GATACGCCGC TTGCGGATGT ATTGCCGACG GTTTTTCAGA AATACCCGGT TCGCTACCGC
GATTACACCC TGCGTGAGCT ATGTCAGGAG ATGCACAACC TGTACGTTAG CTTTGACGTT
AAGGATCTGC AAAAAGCGAT GTTCCGCAAA GAAAGCCTGC CGCATGTGGC GATGAACCCA
CAGGACGCCA ACAGCGCCTT TATTCGCGGC GATGTAGAGC TGGTGCGTAT CAGCGAGGCG
GACGGGCGTA TTGCTGCCGA GGGGGCATTG CCATACCCGC CGGGCGTACT GTGCGTGGTG
CCGGGGGAGA TTTGGGGCGG CGCGGCGCAG CGTTATTTTT TGGCGCTGGA AGAGGGCATC
AATCTGTTGC CCGGTTTTTC GCCTGAATTG CAGGGGGTAT ATAGCGAGAC TGATGCCGAT
GGAATTCAAC GCTTGTACGG ATATGTTTTA AAGTAA
 
Protein sequence
MKSMNIAASG ELIPRLSTHR NVVALDSTDF TDVAAVVITT ADSRSGILAL LKRTGFHLPV 
FMLVDEPVSA PAGVTAVIGG NAQEWLELEN AACRYEAELL PPFYGTLTQY VDMGNSTFAC
PGHQHGEFFR KHPAGRHFYD FFGENLFRAD MCNADVKLGD LLIHEGSAKH AQKFAAKVFN
ADKTYFVLNG TSAANKVVTN ALLTRGDLVL FDRNNHKSNH HGALIQAGAT PVYLEAARNP
FGFIGGIDAH CFDETYLRDQ IRDVMPESAD ASRPFRLAII QLGTYDGTIY NARQVVDKIG
HLCDYILFDS AWVGYEQFIN MMADTSPLRL ELNENDPGIF VTQSVHKQQA GFSQTSQIHK
KDNHIRGQAR FCPHKRLNNA FMLHASTSPF YPLFAALDIN AKIHEGESGR RLWAECVALG
IDARKAILAR CKLLQPFIPL VVDGKPWQAY PTETIASNRR FFSFEPGAKW HGFEGYADDQ
YFVDPCKLLL TTPGIDADSG QYTEFGIPAT ILAHYLRENG IVPEKCDLNS ILFLLTPAES
EEKLARLVAM LAQFERHIED DTPLADVLPT VFQKYPVRYR DYTLRELCQE MHNLYVSFDV
KDLQKAMFRK ESLPHVAMNP QDANSAFIRG DVELVRISEA DGRIAAEGAL PYPPGVLCVV
PGEIWGGAAQ RYFLALEEGI NLLPGFSPEL QGVYSETDAD GIQRLYGYVL K