Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A3185 |
Symbol | kduD |
ID | 6516922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 3081848 |
End bp | 3082609 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642748194 |
Product | 2-deoxy-D-gluconate 3-dehydrogenase |
Protein accession | YP_002115969 |
Protein GI | 194736302 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01832] 2-deoxy-D-gluconate 3-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.358502 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTTGA ATGCATTTTC TCTTGAAGGT AAAGTCGCGG TTGTGACGGG GTGCGATACC GGATTGGGGC AGGGGATGGC GTTAGGGCTG GCGGAAGCGG GCTGTGACAT TGTCGGTATT AACATTGTTG AACCGACGGA CACTATTGCG CGCGTCACCG CTCTGGGACG TCGTTTTTTA AGCCTGACAG CCGATCTGCG TCAAATCGAT GGTATTCCGG CATTACTGGA ACGGGCGGTG GCGGAATACG GTCATATTGA TATTCTGGTG AATAACGCGG GTTTGATCCG TCGTGAAGAT GCGATTGATT TCACGGAAAA AGACTGGGAT GACGTCATGA ACCTGAACAT CAAGAGCGTG TTCTTTATGT CTCAGGCGGC GGCAAAATAT TTTATTGCCC AGGGCAACGG CGGCAAAATT ATTAATATCG CGTCTATGCT CTCCTTCCAG GGCGGCATTC GCGTTCCGTC TTATACCGCG TCGAAAAGCG GCGTAATGGG AATAACACGT CTGATGGCGA ACGAGTGGGC GAAACACAAT ATCAATGTGA ACGCCATCGC ACCGGGCTAT ATGTTCACGA ATAATACCCA GCAATTGCGC GCTGATGCAC AACGTAGCGC CGAAATTCTC GACCGTATTC CGGCTGGACG TTGGGGGCTA CCGGGCGATT TAATGGGCCC GGTAGTCTTC CTGGCATCCA GCGCCGCTGA TTATATTAAC GGCTATACCA TAGCGGTAGA TGGCGGTTGG CTGGCGCGTT AA
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Protein sequence | MILNAFSLEG KVAVVTGCDT GLGQGMALGL AEAGCDIVGI NIVEPTDTIA RVTALGRRFL SLTADLRQID GIPALLERAV AEYGHIDILV NNAGLIRRED AIDFTEKDWD DVMNLNIKSV FFMSQAAAKY FIAQGNGGKI INIASMLSFQ GGIRVPSYTA SKSGVMGITR LMANEWAKHN INVNAIAPGY MFTNNTQQLR ADAQRSAEIL DRIPAGRWGL PGDLMGPVVF LASSAADYIN GYTIAVDGGW LAR
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