Gene SeSA_A3115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3115 
SymbolrelA 
ID6517112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp3007155 
End bp3009389 
Gene Length2235 bp 
Protein Length744 aa 
Translation table11 
GC content55% 
IMG OID642748131 
ProductGDP/GTP pyrophosphokinase 
Protein accessionYP_002115908 
Protein GI194738051 
COG category[T] Signal transduction mechanisms
[K] Transcription 
COG ID[COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases 
TIGRFAM ID[TIGR00691] (p)ppGpp synthetase, RelA/SpoT family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0106723 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGCGG TAAGAAGTGC ACATATTAAT AAAGCTGGTG AATTTGATCC GAAGAAGTGG 
ATCGCAAGCC TGGGAATTTC CAGCCAGCAG TCGTGTGAGC GCTTAGCCGA AACCTGGGCG
TATTGCCTGC AACAGACACA AGGACATCCG GATGCGGATC TGTTGCTGTG GCGTGGCGTG
GAGATGGTAG AAATTCTTTC CACGCTGAGT ATGGATATCG ACACGCTGCG GGCGGCGCTA
CTGTTCCCTC TGGCCGACGC CAACGTAGTC AGCGAAGATG TACTGCGCGA AAGCGTCGGC
AAATCTATCG TGACCCTGAT TCATGGCGTG CGCGATATGG CGGCGATCCG TCAGCTAAAC
GCCACTCATA ACGACTCTGT TTCTTCGGAG CAGGTTGATA ACGTCCGTCG AATGTTATTG
GCGATGGTGG ATGATTTCCG CTGCGTGGTC ATCAAACTGG CCGAGCGAAT CGCTCATTTG
CGCGAAGTGA AAGAGGCGCC GGAAGATGAG CGCGTGCTGG CGGCGAAAGA ATGTACCAAC
ATCTATGCGC CGCTCGCTAA TCGTCTGGGC ATCGGGCAAC TGAAGTGGGA ACTGGAAGAC
TACTGTTTCC GCTACCTGCA TCCGGCGGAA TACAAACGCA TCGCCAAACT GCTGCATGAG
CGCCGTCTCG ATCGCGAACA TTACATCGAA GAGTTTGTTG GACATCTGCG CGCCGAAATG
AAAAACGAAG GCGTGCAGGC GGAAGTCTAC GGACGACCAA AACATATTTA TAGCATCTGG
CGCAAAATGC AGAAAAAGCA TCTGGCGTTT GATGAACTCT TTGACGTGCG TGCCGTGCGT
ATTGTCGCTG AACGTCTGCA GGACTGCTAT GCCGCGTTGG GGATAGTGCA TACGCACTAT
CGCCACCTGC CGGATGAATT CGATGATTAT GTCGCTAACC CGAAACCGAA CGGTTACCAG
TCTATCCACA CCGTGGTCCT GGGGCCGGGC GGTAAAACCG TTGAGATCCA GATTCGTACC
AAACAGATGC ATGAAGACGC CGAACTGGGC GTGGCGGCGC ACTGGAAGTA TAAAGAAGGC
GCCGCGTCCG GCGGCGTGCG TTCCGGTCAT GAAGACAGAA TTGCGTGGCT GCGTAAGCTG
ATCGCCTGGC AGGAAGAGAT GGCCGATTCC GGCGAAATGC TGGATGAAGT GCGCAGCCAG
GTGTTTGACG ATCGGGTCTA CGTTTTTACG CCAAAAGGCG ACGTGGTTGA CTTGCCTGCC
GGTTCTACGC CGCTCGATTT TGCTTACCAC ATCCACAGCG ATGTCGGGCA CCGCTGCATT
GGCGCTAAAA TCGGCGGCCG TATTGTGCCA TTCACCTATC AGTTGCAGAT GGGCGATCAG
GTTGAAATTA TCACGCAGAA GCAGCCGAAT CCCAGCCGCG ACTGGCTGAA TCCAAACCTG
GGCTATGTGA CGACCAGCCG CGGGCGCTCG AAAATTCACG CCTGGTTCCG TAAACAGGAC
CGTGACAAAA ATATTCTGGC TGGACGGCAG ATCCTCGACG ATGAGCTGGC GCATTTAGGG
ATTAGCCTGA AAGAGGCCGA GAAACATCTG CTGCCGCGCT ACAACTTTAA TGAGCTGGAA
GAGTTGCTGG CGGCGATAGG CGGCGGCGAT ATCCGTCTTA ATCAGATGGT GAATTTCCTG
CAATCGCAGT TCAATAAGCC GAGTGCAGAG GAGCAGGATG CAGCGGCGCT GAAACAGCTT
CAGCAAAAAA CATACGCGCC GCAAAATCGT CGTAAAGACG ACGGGCGCGT GGTGGTAGAA
GGCGTGGGTA ATTTGATGCA CCACATTGCC CGCTGCTGCC AGCCGATTCC GGGGGATGAA
ATTGTCGGCT TCATTACTCA GGGGCGGGGG ATTTCCGTGC ACCGGGCCGA TTGCGAACAG
TTGGCGGAAT TGCGCTCACA TGCGCCGGAG CGGATCGTAG AGGCGGTATG GGGCGAAAGC
TACTCGGCGG GATATTCGCT GGTGGTGCGC GTCCAGGCCA ACGATCGCAG CGGTTTATTG
CGTGATATCA CCACCATTCT GGCTAACGAA AAAGTCAACG TGCTGGGCGT CGCCAGCCGC
AGCGACATTA AGCAGCAGAT CGCCACCATT GATATGACCA TCGAGATCTA CAACCTGCAG
GTGCTGGGCC GCGTGCTCGG TAAGCTGAAC CAGGTGCCGG ATGTGATTGA TGCCCGTCGT
TTGCACGGGG GGTAA
 
Protein sequence
MVAVRSAHIN KAGEFDPKKW IASLGISSQQ SCERLAETWA YCLQQTQGHP DADLLLWRGV 
EMVEILSTLS MDIDTLRAAL LFPLADANVV SEDVLRESVG KSIVTLIHGV RDMAAIRQLN
ATHNDSVSSE QVDNVRRMLL AMVDDFRCVV IKLAERIAHL REVKEAPEDE RVLAAKECTN
IYAPLANRLG IGQLKWELED YCFRYLHPAE YKRIAKLLHE RRLDREHYIE EFVGHLRAEM
KNEGVQAEVY GRPKHIYSIW RKMQKKHLAF DELFDVRAVR IVAERLQDCY AALGIVHTHY
RHLPDEFDDY VANPKPNGYQ SIHTVVLGPG GKTVEIQIRT KQMHEDAELG VAAHWKYKEG
AASGGVRSGH EDRIAWLRKL IAWQEEMADS GEMLDEVRSQ VFDDRVYVFT PKGDVVDLPA
GSTPLDFAYH IHSDVGHRCI GAKIGGRIVP FTYQLQMGDQ VEIITQKQPN PSRDWLNPNL
GYVTTSRGRS KIHAWFRKQD RDKNILAGRQ ILDDELAHLG ISLKEAEKHL LPRYNFNELE
ELLAAIGGGD IRLNQMVNFL QSQFNKPSAE EQDAAALKQL QQKTYAPQNR RKDDGRVVVE
GVGNLMHHIA RCCQPIPGDE IVGFITQGRG ISVHRADCEQ LAELRSHAPE RIVEAVWGES
YSAGYSLVVR VQANDRSGLL RDITTILANE KVNVLGVASR SDIKQQIATI DMTIEIYNLQ
VLGRVLGKLN QVPDVIDARR LHGG