| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A3103 |
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| Symbol | queD |
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| ID | 6517673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | + |
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| Start bp | 2998124 |
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| End bp | 2998486 |
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| Gene Length | 363 bp |
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| Protein Length | 120 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642748121 |
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| Product | queuosine biosynthesis protein QueD |
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| Protein accession | YP_002115898 |
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| Protein GI | 194738118 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0720] 6-pyruvoyl-tetrahydropterin synthase |
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| TIGRFAM ID | [TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00330949 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCACCA CGTTGTATAA AGATTTCACC TTTGAAGCCG CTCACCGCCT GCCTCACGTG
CCTGAAGGGC ATAAGTGCGG CCGCCTGCAC GGACACTCGT TTATGGTGCG TCTCGAAATT
ACCGGTGAAG TCGATCCGCA TACCGGTTGG ATTATGGATT TCGCGGATCT CAAAGCGGCG
TTTAAACCTA CTTACGATCG TCTTGATCAC TACTATCTGA ATGATATTCC AGGGCTGTCC
AATCCCACCA GCGAAGTGCT GGCAAAATGG ATTTGGGATC AGGTTAAGCC CGTCGTGCCG
CTACTGAGCG CCGTGATGGT GAAAGAAACC TGTACAGCCG GCTGCGTCTA TCGCGGCGAA
TAA
|
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| Protein sequence | MSTTLYKDFT FEAAHRLPHV PEGHKCGRLH GHSFMVRLEI TGEVDPHTGW IMDFADLKAA
FKPTYDRLDH YYLNDIPGLS NPTSEVLAKW IWDQVKPVVP LLSAVMVKET CTAGCVYRGE
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