Gene SeSA_A3093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3093 
Symbolcse 
ID6516368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp2984004 
End bp2984711 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content49% 
IMG OID642748112 
Productcrispr-associated protein, Cse3 family 
Protein accessionYP_002115889 
Protein GI194737739 
COG category 
COG ID 
TIGRFAM ID[TIGR01907] CRISPR system CASCADE complex protein CasE/Cse3 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCTTT CTCGTATTCA ACTCCGGTTT AATAATTTGC GACCGGAGAT GTTGGCAAAG 
TGGAATTCAG CCAGGCCTTA TGCCAGCCAC CAGTGGTTAT GGCAGCTCTT TCCGGAACAG 
GAATTGCGTC AGTTTCTGTT TCGCGAAGAG GCGCATGGCG GCTTTTTTAT GCTCTCGGCA 
ATACCGCCGT TATCGCAGCA CTCCCTGTTT CTTATTGAAA CAAAACCATT TAATCCGCAA 
CTGACAAATG GTCTTGAGCT TGATTTTCAA CTACGAGCTA ACCCGGTGAT AACCCGTAAC 
GGTAAGCGCA GTGACGTGAT GATGAACGCG AAACATCAGG CGAAGGCGAA TGGTGTGGAG 
AAAGAACGGT GGTGGGAGCT TCAACAGCAG GCCGCGCAGG CGTGGCTGGA ACAACAAGGG 
CAGCAGCATG GTTTCCGGTT GATTGCACCG GAACCTGATG ATTTCGCTAT GTGGGCTGGT 
GACGAGTACA GTGAATTGCA GGCGCATTGT GGATGCGTGC AAGCGTATCA GCAGTATCGT 
TTTGTCCGTA AAGACCAGCA AAAACCGATC ACTTTCAGTA GCGTTGATTT TAGCGGTGCG 
CTCTGTATCA CCGATGCAGC ACTGTTTAAA CAGGCTTTAT TTTCCGGATT AGGTAAAAGT 
AAAGCGCTGG GCTGCGGAAT GCTGATGGTA AAAAGGAAAC GCAGATGA
 
Protein sequence
MYLSRIQLRF NNLRPEMLAK WNSARPYASH QWLWQLFPEQ ELRQFLFREE AHGGFFMLSA 
IPPLSQHSLF LIETKPFNPQ LTNGLELDFQ LRANPVITRN GKRSDVMMNA KHQAKANGVE 
KERWWELQQQ AAQAWLEQQG QQHGFRLIAP EPDDFAMWAG DEYSELQAHC GCVQAYQQYR 
FVRKDQQKPI TFSSVDFSGA LCITDAALFK QALFSGLGKS KALGCGMLMV KRKRR